Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 CLUHP2-201ENST00000426660 1303 ntBASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 RNA5SP412-201ENST00000516234 123 ntBASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 ACE3P-201ENST00000423435 1973 ntBASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM4Q86VH4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 AGAP7P-201ENST00000582299 2062 ntBASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 AGAP14-201ENST00000624701 2060 ntBASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 OR10B1P-201ENST00000601666 907 ntBASIC14.81□□□□□ -0.04
LRRTM4Q86VH4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms