Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 AC136604.1-201ENST00000418535 575 ntBASIC12.11□□□□□ -0.47
FAM78BQ5VT40 AL671277.1-201ENST00000429656 993 ntBASIC12.11□□□□□ -0.47
FAM78BQ5VT40 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 AC099522.2-201ENST00000607001 744 ntBASIC12.11□□□□□ -0.47
FAM78BQ5VT40 AC008267.7-201ENST00000624570 1194 ntBASIC12.11□□□□□ -0.47
FAM78BQ5VT40 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 AP000845.1-201ENST00000581677 2131 ntBASIC12.11□□□□□ -0.47
FAM78BQ5VT40 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 AL355306.1-201ENST00000415580 579 ntBASIC12.1□□□□□ -0.47
FAM78BQ5VT40 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 AC142381.1-201ENST00000426099 345 ntBASIC12.1□□□□□ -0.47
FAM78BQ5VT40 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 FAM86C2P-203ENST00000528684 1004 ntBASIC12.1□□□□□ -0.47
FAM78BQ5VT40 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 AKAP8P1-201ENST00000434743 1349 ntBASIC12.1□□□□□ -0.47
FAM78BQ5VT40 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.1□□□□□ -0.47
FAM78BQ5VT40 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
FAM78BQ5VT40 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
FAM78BQ5VT40 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.09□□□□□ -0.47
FAM78BQ5VT40 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms