Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC013553.1-201ENST00000560906 267 ntBASIC14.39□□□□□ -0.11
RIF1Q5UIP0 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 AC004466.2-201ENST00000614749 516 ntBASIC14.39□□□□□ -0.11
RIF1Q5UIP0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 AP001094.4-201ENST00000579008 2176 ntBASIC14.39□□□□□ -0.11
RIF1Q5UIP0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 AC018638.5-201ENST00000450885 754 ntBASIC14.39□□□□□ -0.11
RIF1Q5UIP0 ALG1L3P-201ENST00000503331 765 ntBASIC14.39□□□□□ -0.11
RIF1Q5UIP0 KNOP1P1-201ENST00000542108 989 ntBASIC14.39□□□□□ -0.11
RIF1Q5UIP0 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 AC136604.1-202ENST00000425471 771 ntBASIC14.38□□□□□ -0.11
RIF1Q5UIP0 MAGEA7P-201ENST00000436482 942 ntBASIC14.38□□□□□ -0.11
RIF1Q5UIP0 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 RN7SL530P-201ENST00000485097 298 ntBASIC14.38□□□□□ -0.11
RIF1Q5UIP0 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 FBXO36P1-201ENST00000579006 471 ntBASIC14.38□□□□□ -0.11
RIF1Q5UIP0 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 HELLS-212ENST00000630929 400 ntTSL 5 BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.38□□□□□ -0.11
RIF1Q5UIP0 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 AC007292.2-201ENST00000593524 1812 ntBASIC14.38□□□□□ -0.11
RIF1Q5UIP0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 AC013726.1-201ENST00000563747 2285 ntBASIC14.38□□□□□ -0.11
RIF1Q5UIP0 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 RNA5SP359-201ENST00000364838 113 ntBASIC14.38□□□□□ -0.11
RIF1Q5UIP0 AHCYP3-201ENST00000420053 1279 ntBASIC14.38□□□□□ -0.11
RIF1Q5UIP0 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.38□□□□□ -0.11
RIF1Q5UIP0 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms