Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.01■□□□□ 0.15
VARS2Q5ST30 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.01■□□□□ 0.15
VARS2Q5ST30 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC16.01■□□□□ 0.15
VARS2Q5ST30 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
VARS2Q5ST30 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
VARS2Q5ST30 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.01■□□□□ 0.15
VARS2Q5ST30 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 INE2-201ENST00000630399 1874 ntBASIC16.01■□□□□ 0.15
VARS2Q5ST30 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
VARS2Q5ST30 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16■□□□□ 0.15
VARS2Q5ST30 LILRP1-201ENST00000444199 1370 ntBASIC16■□□□□ 0.15
VARS2Q5ST30 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VARS2Q5ST30 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VARS2Q5ST30 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
VARS2Q5ST30 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16■□□□□ 0.15
VARS2Q5ST30 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16■□□□□ 0.15
VARS2Q5ST30 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16■□□□□ 0.15
VARS2Q5ST30 AC126365.1-201ENST00000578585 1514 ntBASIC16■□□□□ 0.15
VARS2Q5ST30 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VARS2Q5ST30 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VARS2Q5ST30 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
VARS2Q5ST30 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VARS2Q5ST30 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VARS2Q5ST30 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
VARS2Q5ST30 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
VARS2Q5ST30 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16■□□□□ 0.15
VARS2Q5ST30 RPS26-201ENST00000356464 1183 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VARS2Q5ST30 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16■□□□□ 0.15
VARS2Q5ST30 RN7SKP175-201ENST00000408472 289 ntBASIC16■□□□□ 0.15
VARS2Q5ST30 PAICSP2-201ENST00000429118 1150 ntBASIC16■□□□□ 0.15
VARS2Q5ST30 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16■□□□□ 0.15
VARS2Q5ST30 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC16■□□□□ 0.15
VARS2Q5ST30 ATP6V0CP2-201ENST00000469409 207 ntBASIC16■□□□□ 0.15
VARS2Q5ST30 AC099542.2-201ENST00000474149 553 ntTSL 2 BASIC16■□□□□ 0.15
VARS2Q5ST30 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16■□□□□ 0.15
VARS2Q5ST30 AC126915.1-201ENST00000522847 1038 ntBASIC16■□□□□ 0.15
VARS2Q5ST30 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16■□□□□ 0.15
VARS2Q5ST30 AC005730.2-201ENST00000564549 1184 ntBASIC16■□□□□ 0.15
VARS2Q5ST30 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16■□□□□ 0.15
VARS2Q5ST30 AC138696.2-201ENST00000607376 223 ntBASIC16■□□□□ 0.15
VARS2Q5ST30 AC007663.3-201ENST00000609632 465 ntBASIC16■□□□□ 0.15
VARS2Q5ST30 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16■□□□□ 0.15
VARS2Q5ST30 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16■□□□□ 0.15
VARS2Q5ST30 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
VARS2Q5ST30 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16■□□□□ 0.15
VARS2Q5ST30 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
VARS2Q5ST30 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16■□□□□ 0.15
VARS2Q5ST30 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16■□□□□ 0.15
VARS2Q5ST30 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VARS2Q5ST30 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
VARS2Q5ST30 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16■□□□□ 0.15
VARS2Q5ST30 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
VARS2Q5ST30 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
VARS2Q5ST30 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16■□□□□ 0.15
VARS2Q5ST30 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VARS2Q5ST30 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.99■□□□□ 0.15
VARS2Q5ST30 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VARS2Q5ST30 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VARS2Q5ST30 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VARS2Q5ST30 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VARS2Q5ST30 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VARS2Q5ST30 AC132872.4-202ENST00000622924 2756 ntBASIC15.99■□□□□ 0.15
VARS2Q5ST30 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VARS2Q5ST30 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
VARS2Q5ST30 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
VARS2Q5ST30 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VARS2Q5ST30 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.99■□□□□ 0.15
VARS2Q5ST30 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VARS2Q5ST30 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VARS2Q5ST30 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.99■□□□□ 0.15
VARS2Q5ST30 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
VARS2Q5ST30 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
VARS2Q5ST30 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VARS2Q5ST30 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VARS2Q5ST30 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VARS2Q5ST30 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
VARS2Q5ST30 SSR1P1-201ENST00000407630 814 ntBASIC15.99■□□□□ 0.15
VARS2Q5ST30 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC15.99■□□□□ 0.15
VARS2Q5ST30 AL354877.1-201ENST00000424412 413 ntBASIC15.99■□□□□ 0.15
VARS2Q5ST30 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.99■□□□□ 0.15
VARS2Q5ST30 AKR7A2P1-201ENST00000460134 915 ntBASIC15.99■□□□□ 0.15
VARS2Q5ST30 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VARS2Q5ST30 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
VARS2Q5ST30 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.99■□□□□ 0.15
VARS2Q5ST30 AC020914.3-201ENST00000594712 304 ntBASIC15.99■□□□□ 0.15
VARS2Q5ST30 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.99■□□□□ 0.15
VARS2Q5ST30 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms