Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 AL157407.1-201ENST00000435784 904 ntBASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 CICP12-201ENST00000455801 843 ntBASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 AC073352.2-201ENST00000609385 439 ntBASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 MIR7845-201ENST00000618396 99 ntBASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 AL365203.3-201ENST00000609742 2057 ntBASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 AC239868.1-201ENST00000369385 493 ntBASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 AC026316.1-201ENST00000398900 414 ntBASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 FGFR3P1-201ENST00000449999 601 ntBASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 IQSEC3P1-201ENST00000538799 536 ntBASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 AC026691.1-201ENST00000602502 2017 ntBASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 AC009884.2-201ENST00000603110 324 ntBASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 MEG3_2.1-201ENST00000611456 105 ntBASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 AC103691.2-201ENST00000618824 433 ntBASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 AC023090.2-201ENST00000625182 2110 ntBASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM71Q2Q1W2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms