Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SNRPFP62306 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
SNRPFP62306 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.37■□□□□ 0.21
SNRPFP62306 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNRPFP62306 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SNRPFP62306 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SNRPFP62306 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.36■□□□□ 0.21
SNRPFP62306 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SNRPFP62306 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SNRPFP62306 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.36■□□□□ 0.21
SNRPFP62306 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.36■□□□□ 0.21
SNRPFP62306 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.36■□□□□ 0.21
SNRPFP62306 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.36■□□□□ 0.21
SNRPFP62306 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.36■□□□□ 0.21
SNRPFP62306 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 TPT1P11-201ENST00000458482 498 ntBASIC16.36■□□□□ 0.21
SNRPFP62306 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.36■□□□□ 0.21
SNRPFP62306 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.36■□□□□ 0.21
SNRPFP62306 GCOM2-201ENST00000509133 1104 ntBASIC16.36■□□□□ 0.21
SNRPFP62306 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.36■□□□□ 0.21
SNRPFP62306 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
SNRPFP62306 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.36■□□□□ 0.21
SNRPFP62306 AC106820.3-201ENST00000561653 397 ntBASIC16.36■□□□□ 0.21
SNRPFP62306 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.36■□□□□ 0.21
SNRPFP62306 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.36■□□□□ 0.21
SNRPFP62306 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SNRPFP62306 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SNRPFP62306 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SNRPFP62306 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.36■□□□□ 0.21
SNRPFP62306 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.36■□□□□ 0.21
SNRPFP62306 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRPFP62306 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.35■□□□□ 0.21
SNRPFP62306 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.35■□□□□ 0.21
SNRPFP62306 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SNRPFP62306 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SNRPFP62306 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.35■□□□□ 0.21
SNRPFP62306 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SNRPFP62306 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SNRPFP62306 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.35■□□□□ 0.21
SNRPFP62306 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.35■□□□□ 0.21
SNRPFP62306 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.35■□□□□ 0.21
SNRPFP62306 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.35■□□□□ 0.21
SNRPFP62306 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.35■□□□□ 0.21
SNRPFP62306 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SNRPFP62306 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.35■□□□□ 0.21
SNRPFP62306 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.35■□□□□ 0.21
SNRPFP62306 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.35■□□□□ 0.21
SNRPFP62306 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SNRPFP62306 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.35■□□□□ 0.21
SNRPFP62306 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SNRPFP62306 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SNRPFP62306 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNRPFP62306 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms