Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SRP54P61011 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.96□□□□□ -0.01
SRP54P61011 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.96□□□□□ -0.01
SRP54P61011 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.96□□□□□ -0.01
SRP54P61011 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SRP54P61011 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRP54P61011 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SRP54P61011 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.96□□□□□ -0.02
SRP54P61011 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SRP54P61011 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
SRP54P61011 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.96□□□□□ -0.02
SRP54P61011 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
SRP54P61011 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.96□□□□□ -0.02
SRP54P61011 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
SRP54P61011 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SRP54P61011 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.96□□□□□ -0.02
SRP54P61011 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SRP54P61011 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.95□□□□□ -0.02
SRP54P61011 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.95□□□□□ -0.02
SRP54P61011 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SRP54P61011 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SRP54P61011 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.95□□□□□ -0.02
SRP54P61011 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SRP54P61011 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.95□□□□□ -0.02
SRP54P61011 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.95□□□□□ -0.02
SRP54P61011 MIR326-201ENST00000362220 95 ntBASIC14.95□□□□□ -0.02
SRP54P61011 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SRP54P61011 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 GHSR-202ENST00000427970 912 ntBASIC14.95□□□□□ -0.02
SRP54P61011 FAM8A4P-201ENST00000435433 1213 ntBASIC14.95□□□□□ -0.02
SRP54P61011 Z93015.1-201ENST00000451718 390 ntBASIC14.95□□□□□ -0.02
SRP54P61011 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.95□□□□□ -0.02
SRP54P61011 FAM86HP-204ENST00000513466 959 ntBASIC14.95□□□□□ -0.02
SRP54P61011 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.95□□□□□ -0.02
SRP54P61011 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.95□□□□□ -0.02
SRP54P61011 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.95□□□□□ -0.02
SRP54P61011 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SRP54P61011 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 AC055811.4-201ENST00000624039 1754 ntBASIC14.95□□□□□ -0.02
SRP54P61011 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.95□□□□□ -0.02
SRP54P61011 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SRP54P61011 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 AC087481.3-201ENST00000602886 1894 ntBASIC14.95□□□□□ -0.02
SRP54P61011 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.95□□□□□ -0.02
SRP54P61011 AC020658.6-201ENST00000623564 1870 ntBASIC14.95□□□□□ -0.02
SRP54P61011 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SRP54P61011 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SRP54P61011 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 AL360270.3-201ENST00000609118 1348 ntBASIC14.94□□□□□ -0.02
SRP54P61011 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
SRP54P61011 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.94□□□□□ -0.02
SRP54P61011 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.94□□□□□ -0.02
SRP54P61011 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SRP54P61011 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SRP54P61011 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SRP54P61011 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
SRP54P61011 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.94□□□□□ -0.02
SRP54P61011 HOMER2P2-201ENST00000451621 847 ntBASIC14.94□□□□□ -0.02
SRP54P61011 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.94□□□□□ -0.02
SRP54P61011 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SRP54P61011 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms