Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SPCS3P61009 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPCS3P61009 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPCS3P61009 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPCS3P61009 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SPCS3P61009 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPCS3P61009 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPCS3P61009 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPCS3P61009 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
SPCS3P61009 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPCS3P61009 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.42□□□□□ -0.42
SPCS3P61009 KRT8P12-202ENST00000472924 1397 ntBASIC12.42□□□□□ -0.42
SPCS3P61009 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
SPCS3P61009 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.42□□□□□ -0.42
SPCS3P61009 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
SPCS3P61009 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.41□□□□□ -0.42
SPCS3P61009 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.41□□□□□ -0.42
SPCS3P61009 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SPCS3P61009 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.41□□□□□ -0.42
SPCS3P61009 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.41□□□□□ -0.42
SPCS3P61009 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.41□□□□□ -0.42
SPCS3P61009 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.41□□□□□ -0.42
SPCS3P61009 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
SPCS3P61009 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SPCS3P61009 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SPCS3P61009 AL133267.1-201ENST00000398220 340 ntBASIC12.41□□□□□ -0.42
SPCS3P61009 AC005237.2-201ENST00000434368 219 ntBASIC12.41□□□□□ -0.42
SPCS3P61009 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.41□□□□□ -0.42
SPCS3P61009 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.41□□□□□ -0.42
SPCS3P61009 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.41□□□□□ -0.42
SPCS3P61009 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.41□□□□□ -0.42
SPCS3P61009 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.41□□□□□ -0.42
SPCS3P61009 SLC25A1P1-201ENST00000528351 927 ntBASIC12.41□□□□□ -0.42
SPCS3P61009 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.41□□□□□ -0.42
SPCS3P61009 BANF1P1-201ENST00000553684 263 ntBASIC12.41□□□□□ -0.42
SPCS3P61009 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.41□□□□□ -0.42
SPCS3P61009 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.41□□□□□ -0.42
SPCS3P61009 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.41□□□□□ -0.42
SPCS3P61009 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.41□□□□□ -0.42
SPCS3P61009 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SPCS3P61009 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.41□□□□□ -0.42
SPCS3P61009 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
SPCS3P61009 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.41□□□□□ -0.42
SPCS3P61009 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SPCS3P61009 AL035456.1-201ENST00000456064 1369 ntBASIC12.41□□□□□ -0.42
SPCS3P61009 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.41□□□□□ -0.42
SPCS3P61009 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.41□□□□□ -0.42
SPCS3P61009 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SPCS3P61009 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SPCS3P61009 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPCS3P61009 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.4□□□□□ -0.42
SPCS3P61009 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SPCS3P61009 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
SPCS3P61009 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.4□□□□□ -0.42
SPCS3P61009 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SPCS3P61009 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SPCS3P61009 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.4□□□□□ -0.42
SPCS3P61009 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SPCS3P61009 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
SPCS3P61009 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.4□□□□□ -0.42
SPCS3P61009 AC007614.4-201ENST00000564048 1827 ntBASIC12.4□□□□□ -0.42
SPCS3P61009 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SPCS3P61009 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SPCS3P61009 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SPCS3P61009 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SPCS3P61009 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SPCS3P61009 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SPCS3P61009 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SPCS3P61009 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.4□□□□□ -0.42
SPCS3P61009 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.4□□□□□ -0.42
SPCS3P61009 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SPCS3P61009 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.4□□□□□ -0.42
SPCS3P61009 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SPCS3P61009 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.4□□□□□ -0.42
SPCS3P61009 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.4□□□□□ -0.42
SPCS3P61009 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.4□□□□□ -0.42
SPCS3P61009 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.4□□□□□ -0.42
SPCS3P61009 AC120114.3-201ENST00000611923 658 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms