Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.67□□□□□ -0.22
SUMO3P55854 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
SUMO3P55854 FTLP10-202ENST00000505798 471 ntBASIC13.67□□□□□ -0.22
SUMO3P55854 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SUMO3P55854 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.67□□□□□ -0.22
SUMO3P55854 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SUMO3P55854 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.67□□□□□ -0.22
SUMO3P55854 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.67□□□□□ -0.22
SUMO3P55854 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SUMO3P55854 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
SUMO3P55854 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SUMO3P55854 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SUMO3P55854 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.67□□□□□ -0.22
SUMO3P55854 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
SUMO3P55854 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SUMO3P55854 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.67□□□□□ -0.22
SUMO3P55854 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SUMO3P55854 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SUMO3P55854 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
SUMO3P55854 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SUMO3P55854 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SUMO3P55854 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.67□□□□□ -0.22
SUMO3P55854 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SUMO3P55854 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.67□□□□□ -0.22
SUMO3P55854 AC003102.2-201ENST00000589195 1469 ntBASIC13.67□□□□□ -0.22
SUMO3P55854 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.67□□□□□ -0.22
SUMO3P55854 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SUMO3P55854 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SUMO3P55854 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SUMO3P55854 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SUMO3P55854 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SUMO3P55854 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.66□□□□□ -0.22
SUMO3P55854 AL138725.1-201ENST00000407347 1314 ntBASIC13.66□□□□□ -0.22
SUMO3P55854 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.66□□□□□ -0.22
SUMO3P55854 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.66□□□□□ -0.22
SUMO3P55854 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.66□□□□□ -0.22
SUMO3P55854 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 AC103702.1-201ENST00000548801 2630 ntBASIC13.66□□□□□ -0.22
SUMO3P55854 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.66□□□□□ -0.22
SUMO3P55854 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SUMO3P55854 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.66□□□□□ -0.22
SUMO3P55854 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.66□□□□□ -0.22
SUMO3P55854 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
SUMO3P55854 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
SUMO3P55854 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.66□□□□□ -0.22
SUMO3P55854 ARSEP1-201ENST00000420443 635 ntBASIC13.66□□□□□ -0.22
SUMO3P55854 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.66□□□□□ -0.22
SUMO3P55854 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.66□□□□□ -0.22
SUMO3P55854 FTH1P14-201ENST00000482930 551 ntBASIC13.66□□□□□ -0.22
SUMO3P55854 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.66□□□□□ -0.22
SUMO3P55854 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.66□□□□□ -0.22
SUMO3P55854 KRT90P-201ENST00000549264 1064 ntBASIC13.66□□□□□ -0.22
SUMO3P55854 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.66□□□□□ -0.22
SUMO3P55854 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.66□□□□□ -0.22
SUMO3P55854 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.66□□□□□ -0.22
SUMO3P55854 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.66□□□□□ -0.22
SUMO3P55854 AC138466.3-201ENST00000619983 221 ntBASIC13.66□□□□□ -0.22
SUMO3P55854 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.66□□□□□ -0.22
SUMO3P55854 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.66□□□□□ -0.22
SUMO3P55854 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.66□□□□□ -0.22
SUMO3P55854 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.66□□□□□ -0.22
SUMO3P55854 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 CICP23-201ENST00000605013 2741 ntBASIC13.66□□□□□ -0.22
SUMO3P55854 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SUMO3P55854 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SUMO3P55854 SALL4P5-201ENST00000419001 1760 ntBASIC13.66□□□□□ -0.22
SUMO3P55854 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SUMO3P55854 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SUMO3P55854 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SUMO3P55854 AC063926.2-201ENST00000623766 1308 ntBASIC13.65□□□□□ -0.22
SUMO3P55854 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SUMO3P55854 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
SUMO3P55854 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SUMO3P55854 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.65□□□□□ -0.22
SUMO3P55854 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SUMO3P55854 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SUMO3P55854 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms