Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 FO681548.1-201ENST00000455617 1132 ntBASIC19.21■□□□□ 0.67
BRPF1P55201 PFN1P12-201ENST00000455938 534 ntBASIC19.21■□□□□ 0.67
BRPF1P55201 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BRPF1P55201 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
BRPF1P55201 AC131206.1-201ENST00000538078 1211 ntBASIC19.21■□□□□ 0.67
BRPF1P55201 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
BRPF1P55201 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.21■□□□□ 0.67
BRPF1P55201 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC19.21■□□□□ 0.67
BRPF1P55201 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC19.21■□□□□ 0.67
BRPF1P55201 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC19.21■□□□□ 0.67
BRPF1P55201 AC138466.3-201ENST00000619983 221 ntBASIC19.21■□□□□ 0.67
BRPF1P55201 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC19.21■□□□□ 0.67
BRPF1P55201 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRPF1P55201 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
BRPF1P55201 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRPF1P55201 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRPF1P55201 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC19.21■□□□□ 0.67
BRPF1P55201 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
BRPF1P55201 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BRPF1P55201 AC007292.2-201ENST00000593524 1812 ntBASIC19.21■□□□□ 0.67
BRPF1P55201 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.2■□□□□ 0.66
BRPF1P55201 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRPF1P55201 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRPF1P55201 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
BRPF1P55201 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
BRPF1P55201 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRPF1P55201 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRPF1P55201 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRPF1P55201 LBX2-201ENST00000341396 886 ntTSL 3 BASIC19.2■□□□□ 0.66
BRPF1P55201 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRPF1P55201 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
BRPF1P55201 AL355864.2-201ENST00000447420 863 ntBASIC19.2■□□□□ 0.66
BRPF1P55201 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
BRPF1P55201 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRPF1P55201 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC19.2■□□□□ 0.66
BRPF1P55201 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.2■□□□□ 0.66
BRPF1P55201 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.2■□□□□ 0.66
BRPF1P55201 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.2■□□□□ 0.66
BRPF1P55201 AL022328.1-201ENST00000610050 478 ntBASIC19.2■□□□□ 0.66
BRPF1P55201 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRPF1P55201 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRPF1P55201 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRPF1P55201 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRPF1P55201 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRPF1P55201 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRPF1P55201 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRPF1P55201 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
BRPF1P55201 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
BRPF1P55201 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRPF1P55201 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRPF1P55201 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.2■□□□□ 0.66
BRPF1P55201 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRPF1P55201 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.19■□□□□ 0.66
BRPF1P55201 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRPF1P55201 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.19■□□□□ 0.66
BRPF1P55201 AP000593.2-201ENST00000542775 1433 ntBASIC19.19■□□□□ 0.66
BRPF1P55201 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRPF1P55201 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
BRPF1P55201 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
BRPF1P55201 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC19.19■□□□□ 0.66
BRPF1P55201 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRPF1P55201 MIR1247-201ENST00000408206 136 ntBASIC19.19■□□□□ 0.66
BRPF1P55201 GPAA1P2-201ENST00000417923 928 ntBASIC19.19■□□□□ 0.66
BRPF1P55201 FAM21FP-201ENST00000426241 1131 ntBASIC19.19■□□□□ 0.66
BRPF1P55201 ALG3P1-201ENST00000508806 1114 ntBASIC19.19■□□□□ 0.66
BRPF1P55201 EMC4-209ENST00000559421 497 ntTSL 2 BASIC19.19■□□□□ 0.66
BRPF1P55201 MIR6727-201ENST00000620702 65 ntBASIC19.19■□□□□ 0.66
BRPF1P55201 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC19.19■□□□□ 0.66
BRPF1P55201 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRPF1P55201 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRPF1P55201 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRPF1P55201 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRPF1P55201 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRPF1P55201 MX1-218ENST00000619682 1980 ntTSL 5 BASIC19.19■□□□□ 0.66
BRPF1P55201 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.19■□□□□ 0.66
BRPF1P55201 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRPF1P55201 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRPF1P55201 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC19.19■□□□□ 0.66
BRPF1P55201 USP35-204ENST00000530267 2419 ntTSL 2 BASIC19.19■□□□□ 0.66
BRPF1P55201 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRPF1P55201 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRPF1P55201 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
BRPF1P55201 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
BRPF1P55201 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRPF1P55201 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC19.18■□□□□ 0.66
BRPF1P55201 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRPF1P55201 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRPF1P55201 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
BRPF1P55201 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRPF1P55201 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC19.18■□□□□ 0.66
BRPF1P55201 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRPF1P55201 MTHFR-210ENST00000641407 2387 ntBASIC19.18■□□□□ 0.66
BRPF1P55201 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.18■□□□□ 0.66
BRPF1P55201 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRPF1P55201 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRPF1P55201 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRPF1P55201 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRPF1P55201 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.18■□□□□ 0.66
BRPF1P55201 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC19.18■□□□□ 0.66
BRPF1P55201 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms