Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
LIMK1P53667 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.89□□□□□ -0.03
LIMK1P53667 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 SSR4P1-203ENST00000599569 2260 ntBASIC14.89□□□□□ -0.03
LIMK1P53667 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LIMK1P53667 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LIMK1P53667 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.89□□□□□ -0.03
LIMK1P53667 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 POM121L8P-201ENST00000417732 1281 ntBASIC14.89□□□□□ -0.03
LIMK1P53667 PFN2-202ENST00000423691 911 ntTSL 2 BASIC14.89□□□□□ -0.03
LIMK1P53667 AC097065.1-201ENST00000425737 517 ntBASIC14.89□□□□□ -0.03
LIMK1P53667 AC078991.1-201ENST00000437297 610 ntBASIC14.89□□□□□ -0.03
LIMK1P53667 POM121L9P-203ENST00000441984 1285 ntBASIC14.89□□□□□ -0.03
LIMK1P53667 RNMTL1P1-201ENST00000454103 560 ntBASIC14.89□□□□□ -0.03
LIMK1P53667 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 RPL18P13-201ENST00000478088 569 ntBASIC14.89□□□□□ -0.03
LIMK1P53667 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 AL391280.1-201ENST00000506969 1062 ntBASIC14.89□□□□□ -0.03
LIMK1P53667 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.89□□□□□ -0.03
LIMK1P53667 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.89□□□□□ -0.03
LIMK1P53667 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC14.89□□□□□ -0.03
LIMK1P53667 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.89□□□□□ -0.03
LIMK1P53667 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.89□□□□□ -0.03
LIMK1P53667 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 AC051619.9-201ENST00000623237 597 ntBASIC14.89□□□□□ -0.03
LIMK1P53667 AL603764.1-201ENST00000636452 321 ntBASIC14.89□□□□□ -0.03
LIMK1P53667 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LIMK1P53667 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LIMK1P53667 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.89□□□□□ -0.03
LIMK1P53667 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 AL009178.2-201ENST00000597278 2719 ntBASIC14.89□□□□□ -0.03
LIMK1P53667 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.89□□□□□ -0.03
LIMK1P53667 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LIMK1P53667 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK1P53667 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.88□□□□□ -0.03
LIMK1P53667 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.88□□□□□ -0.03
LIMK1P53667 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK1P53667 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK1P53667 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.88□□□□□ -0.03
LIMK1P53667 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK1P53667 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.88□□□□□ -0.03
LIMK1P53667 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.88□□□□□ -0.03
LIMK1P53667 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK1P53667 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.88□□□□□ -0.03
LIMK1P53667 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LIMK1P53667 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK1P53667 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LIMK1P53667 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LIMK1P53667 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK1P53667 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK1P53667 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK1P53667 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LIMK1P53667 ISCA2P1-201ENST00000425548 448 ntBASIC14.88□□□□□ -0.03
LIMK1P53667 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.88□□□□□ -0.03
LIMK1P53667 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.88□□□□□ -0.03
LIMK1P53667 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK1P53667 AC106820.3-201ENST00000561653 397 ntBASIC14.88□□□□□ -0.03
LIMK1P53667 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LIMK1P53667 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.88□□□□□ -0.03
LIMK1P53667 AL031713.1-201ENST00000564813 661 ntBASIC14.88□□□□□ -0.03
LIMK1P53667 MIR4754-201ENST00000582477 89 ntBASIC14.88□□□□□ -0.03
LIMK1P53667 GMFG-209ENST00000600322 622 ntTSL 5 BASIC14.88□□□□□ -0.03
LIMK1P53667 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.88□□□□□ -0.03
LIMK1P53667 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.88□□□□□ -0.03
LIMK1P53667 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK1P53667 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LIMK1P53667 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK1P53667 AC004899.1-201ENST00000424687 1714 ntBASIC14.88□□□□□ -0.03
LIMK1P53667 AC069224.1-201ENST00000566372 1715 ntBASIC14.88□□□□□ -0.03
LIMK1P53667 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LIMK1P53667 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK1P53667 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LIMK1P53667 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK1P53667 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LIMK1P53667 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK1P53667 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.88□□□□□ -0.03
LIMK1P53667 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.88□□□□□ -0.03
LIMK1P53667 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.88□□□□□ -0.03
LIMK1P53667 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms