Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CPT1AP50416 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPT1AP50416 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.6■□□□□ 0.25
CPT1AP50416 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
CPT1AP50416 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CPT1AP50416 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CPT1AP50416 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CPT1AP50416 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPT1AP50416 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPT1AP50416 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPT1AP50416 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.59■□□□□ 0.25
CPT1AP50416 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPT1AP50416 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPT1AP50416 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPT1AP50416 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPT1AP50416 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.59■□□□□ 0.25
CPT1AP50416 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
CPT1AP50416 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.59■□□□□ 0.25
CPT1AP50416 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.59■□□□□ 0.25
CPT1AP50416 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.59■□□□□ 0.25
CPT1AP50416 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.59■□□□□ 0.25
CPT1AP50416 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.59■□□□□ 0.25
CPT1AP50416 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.59■□□□□ 0.25
CPT1AP50416 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.59■□□□□ 0.25
CPT1AP50416 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CPT1AP50416 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.59■□□□□ 0.25
CPT1AP50416 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.59■□□□□ 0.25
CPT1AP50416 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPT1AP50416 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPT1AP50416 AC006480.2-201ENST00000609770 1337 ntBASIC16.59■□□□□ 0.25
CPT1AP50416 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPT1AP50416 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPT1AP50416 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.59■□□□□ 0.25
CPT1AP50416 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPT1AP50416 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPT1AP50416 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPT1AP50416 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.58■□□□□ 0.25
CPT1AP50416 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
CPT1AP50416 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CPT1AP50416 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.58■□□□□ 0.25
CPT1AP50416 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CPT1AP50416 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPT1AP50416 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CPT1AP50416 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPT1AP50416 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPT1AP50416 AC239868.1-201ENST00000369385 493 ntBASIC16.58■□□□□ 0.24
CPT1AP50416 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPT1AP50416 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CPT1AP50416 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.58■□□□□ 0.24
CPT1AP50416 CEP164P1-201ENST00000455142 418 ntBASIC16.58■□□□□ 0.24
CPT1AP50416 CICP12-201ENST00000455801 843 ntBASIC16.58■□□□□ 0.24
CPT1AP50416 AC019193.1-201ENST00000506678 823 ntBASIC16.58■□□□□ 0.24
CPT1AP50416 IGLV3-15-201ENST00000518356 244 ntBASIC16.58■□□□□ 0.24
CPT1AP50416 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.58■□□□□ 0.24
CPT1AP50416 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.58■□□□□ 0.24
CPT1AP50416 MIR4754-201ENST00000582477 89 ntBASIC16.58■□□□□ 0.24
CPT1AP50416 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.58■□□□□ 0.24
CPT1AP50416 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.58■□□□□ 0.24
CPT1AP50416 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CPT1AP50416 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CPT1AP50416 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.58■□□□□ 0.24
CPT1AP50416 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CPT1AP50416 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.58■□□□□ 0.24
CPT1AP50416 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPT1AP50416 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPT1AP50416 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPT1AP50416 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPT1AP50416 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.58■□□□□ 0.24
CPT1AP50416 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPT1AP50416 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CPT1AP50416 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.58■□□□□ 0.24
CPT1AP50416 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.58■□□□□ 0.24
CPT1AP50416 AC023090.2-201ENST00000625182 2110 ntBASIC16.58■□□□□ 0.24
CPT1AP50416 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPT1AP50416 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPT1AP50416 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPT1AP50416 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPT1AP50416 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPT1AP50416 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.58■□□□□ 0.24
CPT1AP50416 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CPT1AP50416 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPT1AP50416 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPT1AP50416 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPT1AP50416 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPT1AP50416 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPT1AP50416 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CPT1AP50416 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.57■□□□□ 0.24
CPT1AP50416 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPT1AP50416 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPT1AP50416 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CPT1AP50416 ZBED1P1-201ENST00000502364 1930 ntBASIC16.57■□□□□ 0.24
CPT1AP50416 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPT1AP50416 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPT1AP50416 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPT1AP50416 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPT1AP50416 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.57■□□□□ 0.24
CPT1AP50416 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.57■□□□□ 0.24
CPT1AP50416 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPT1AP50416 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPT1AP50416 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms