Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GRIA1P42261 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
GRIA1P42261 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
GRIA1P42261 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
GRIA1P42261 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
GRIA1P42261 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GRIA1P42261 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.33■□□□□ 0.04
GRIA1P42261 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.33■□□□□ 0.04
GRIA1P42261 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.33■□□□□ 0.04
GRIA1P42261 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GRIA1P42261 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GRIA1P42261 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GRIA1P42261 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GRIA1P42261 RNU1-114P-201ENST00000365297 166 ntBASIC15.33■□□□□ 0.04
GRIA1P42261 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GRIA1P42261 MIR770-201ENST00000390219 98 ntBASIC15.33■□□□□ 0.04
GRIA1P42261 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.33■□□□□ 0.04
GRIA1P42261 C1QBPP1-201ENST00000400117 770 ntBASIC15.33■□□□□ 0.04
GRIA1P42261 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.33■□□□□ 0.04
GRIA1P42261 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
GRIA1P42261 RPL13AP25-201ENST00000484130 612 ntBASIC15.33■□□□□ 0.04
GRIA1P42261 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.33■□□□□ 0.04
GRIA1P42261 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.33■□□□□ 0.04
GRIA1P42261 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.33■□□□□ 0.04
GRIA1P42261 AP001582.1-201ENST00000525856 295 ntBASIC15.33■□□□□ 0.04
GRIA1P42261 AC092552.1-201ENST00000547243 906 ntBASIC15.33■□□□□ 0.04
GRIA1P42261 AC123567.1-201ENST00000548294 1261 ntBASIC15.33■□□□□ 0.04
GRIA1P42261 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.33■□□□□ 0.04
GRIA1P42261 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.33■□□□□ 0.04
GRIA1P42261 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.33■□□□□ 0.04
GRIA1P42261 AC007431.3-201ENST00000623221 587 ntBASIC15.33■□□□□ 0.04
GRIA1P42261 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.33■□□□□ 0.04
GRIA1P42261 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
GRIA1P42261 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GRIA1P42261 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GRIA1P42261 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GRIA1P42261 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GRIA1P42261 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
GRIA1P42261 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.33■□□□□ 0.04
GRIA1P42261 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GRIA1P42261 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.33■□□□□ 0.04
GRIA1P42261 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
GRIA1P42261 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GRIA1P42261 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GRIA1P42261 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.33■□□□□ 0.04
GRIA1P42261 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GRIA1P42261 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GRIA1P42261 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GRIA1P42261 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.33■□□□□ 0.04
GRIA1P42261 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GRIA1P42261 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA1P42261 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.32■□□□□ 0.04
GRIA1P42261 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA1P42261 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIA1P42261 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA1P42261 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA1P42261 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GRIA1P42261 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GRIA1P42261 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA1P42261 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA1P42261 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA1P42261 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA1P42261 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.32■□□□□ 0.04
GRIA1P42261 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIA1P42261 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
GRIA1P42261 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GRIA1P42261 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
GRIA1P42261 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.32■□□□□ 0.04
GRIA1P42261 AL139094.1-201ENST00000405549 1188 ntBASIC15.32■□□□□ 0.04
GRIA1P42261 TSPY16P-201ENST00000449843 468 ntBASIC15.32■□□□□ 0.04
GRIA1P42261 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIA1P42261 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.32■□□□□ 0.04
GRIA1P42261 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIA1P42261 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.32■□□□□ 0.04
GRIA1P42261 AL132655.2-201ENST00000596276 594 ntBASIC15.32■□□□□ 0.04
GRIA1P42261 AC093726.1-201ENST00000608064 963 ntBASIC15.32■□□□□ 0.04
GRIA1P42261 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA1P42261 AC009118.2-201ENST00000613275 655 ntBASIC15.32■□□□□ 0.04
GRIA1P42261 AC008761.3-201ENST00000624803 892 ntBASIC15.32■□□□□ 0.04
GRIA1P42261 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA1P42261 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA1P42261 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.32■□□□□ 0.04
GRIA1P42261 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
GRIA1P42261 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
GRIA1P42261 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
GRIA1P42261 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA1P42261 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA1P42261 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA1P42261 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA1P42261 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA1P42261 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
GRIA1P42261 AC007541.1-201ENST00000570282 1469 ntBASIC15.32■□□□□ 0.04
GRIA1P42261 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIA1P42261 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GRIA1P42261 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
GRIA1P42261 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA1P42261 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA1P42261 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIA1P42261 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
GRIA1P42261 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms