Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
MDH1P40925 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
MDH1P40925 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
MDH1P40925 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.22■□□□□ 0.03
MDH1P40925 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
MDH1P40925 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
MDH1P40925 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
MDH1P40925 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
MDH1P40925 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.22■□□□□ 0.03
MDH1P40925 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.22■□□□□ 0.03
MDH1P40925 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.22■□□□□ 0.03
MDH1P40925 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.22■□□□□ 0.03
MDH1P40925 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
MDH1P40925 AC108751.1-201ENST00000490852 363 ntBASIC15.22■□□□□ 0.03
MDH1P40925 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.22■□□□□ 0.03
MDH1P40925 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.22■□□□□ 0.03
MDH1P40925 AC023141.13-201ENST00000604991 943 ntBASIC15.22■□□□□ 0.03
MDH1P40925 AL031008.1-201ENST00000619963 541 ntBASIC15.22■□□□□ 0.03
MDH1P40925 AC117500.6-201ENST00000624871 588 ntBASIC15.22■□□□□ 0.03
MDH1P40925 AC007064.4-201ENST00000637740 555 ntBASIC15.22■□□□□ 0.03
MDH1P40925 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
MDH1P40925 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
MDH1P40925 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
MDH1P40925 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.22■□□□□ 0.03
MDH1P40925 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC15.22■□□□□ 0.03
MDH1P40925 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.22■□□□□ 0.03
MDH1P40925 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC15.22■□□□□ 0.03
MDH1P40925 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
MDH1P40925 AL118506.1-201ENST00000601296 3082 ntBASIC15.22■□□□□ 0.03
MDH1P40925 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
MDH1P40925 TP73-207ENST00000378290 1831 ntTSL 2 BASIC15.22■□□□□ 0.03
MDH1P40925 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC15.22■□□□□ 0.03
MDH1P40925 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.21■□□□□ 0.03
MDH1P40925 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
MDH1P40925 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MDH1P40925 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
MDH1P40925 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MDH1P40925 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.21■□□□□ 0.03
MDH1P40925 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MDH1P40925 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MDH1P40925 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.21■□□□□ 0.03
MDH1P40925 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MDH1P40925 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC15.21■□□□□ 0.03
MDH1P40925 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.21■□□□□ 0.03
MDH1P40925 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
MDH1P40925 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC15.21■□□□□ 0.03
MDH1P40925 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC15.21■□□□□ 0.03
MDH1P40925 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
MDH1P40925 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MDH1P40925 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
MDH1P40925 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MDH1P40925 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MDH1P40925 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.21■□□□□ 0.03
MDH1P40925 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC15.21■□□□□ 0.03
MDH1P40925 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
MDH1P40925 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.21■□□□□ 0.03
MDH1P40925 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MDH1P40925 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MDH1P40925 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
MDH1P40925 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
MDH1P40925 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
MDH1P40925 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
MDH1P40925 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.21■□□□□ 0.03
MDH1P40925 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
MDH1P40925 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.21■□□□□ 0.03
MDH1P40925 RNPS1P1-201ENST00000507437 918 ntBASIC15.21■□□□□ 0.03
MDH1P40925 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.21■□□□□ 0.03
MDH1P40925 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
MDH1P40925 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.21■□□□□ 0.03
MDH1P40925 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.21■□□□□ 0.03
MDH1P40925 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.21■□□□□ 0.03
MDH1P40925 AL445228.2-201ENST00000605589 952 ntBASIC15.21■□□□□ 0.03
MDH1P40925 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.21■□□□□ 0.03
MDH1P40925 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MDH1P40925 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
MDH1P40925 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC15.21■□□□□ 0.03
MDH1P40925 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms