Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.27□□□□□ -0.29
GDNFP39905 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.27□□□□□ -0.29
GDNFP39905 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.27□□□□□ -0.29
GDNFP39905 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDNFP39905 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDNFP39905 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDNFP39905 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDNFP39905 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDNFP39905 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDNFP39905 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDNFP39905 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDNFP39905 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDNFP39905 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.27□□□□□ -0.29
GDNFP39905 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDNFP39905 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.27□□□□□ -0.29
GDNFP39905 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.26□□□□□ -0.29
GDNFP39905 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GDNFP39905 AC099521.3-201ENST00000624251 2938 ntBASIC13.26□□□□□ -0.29
GDNFP39905 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDNFP39905 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDNFP39905 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDNFP39905 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDNFP39905 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDNFP39905 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
GDNFP39905 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GDNFP39905 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDNFP39905 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
GDNFP39905 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.26□□□□□ -0.29
GDNFP39905 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDNFP39905 MIR1233-2-201ENST00000408138 82 ntBASIC13.26□□□□□ -0.29
GDNFP39905 MIR1233-1-201ENST00000408722 82 ntBASIC13.26□□□□□ -0.29
GDNFP39905 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.26□□□□□ -0.29
GDNFP39905 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.26□□□□□ -0.29
GDNFP39905 RPS8P6-201ENST00000426177 609 ntBASIC13.26□□□□□ -0.29
GDNFP39905 CNN2P11-201ENST00000429351 262 ntBASIC13.26□□□□□ -0.29
GDNFP39905 RBPMS2P1-201ENST00000437762 623 ntBASIC13.26□□□□□ -0.29
GDNFP39905 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GDNFP39905 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.26□□□□□ -0.29
GDNFP39905 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.26□□□□□ -0.29
GDNFP39905 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.26□□□□□ -0.29
GDNFP39905 AP006288.1-201ENST00000446065 395 ntBASIC13.26□□□□□ -0.29
GDNFP39905 KRT8P37-201ENST00000451609 1420 ntBASIC13.26□□□□□ -0.29
GDNFP39905 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.26□□□□□ -0.29
GDNFP39905 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.26□□□□□ -0.29
GDNFP39905 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
GDNFP39905 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.26□□□□□ -0.29
GDNFP39905 AC097359.3-201ENST00000603982 1210 ntBASIC13.26□□□□□ -0.29
GDNFP39905 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GDNFP39905 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.26□□□□□ -0.29
GDNFP39905 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDNFP39905 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.26□□□□□ -0.29
GDNFP39905 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
GDNFP39905 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDNFP39905 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
GDNFP39905 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
GDNFP39905 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GDNFP39905 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.26□□□□□ -0.29
GDNFP39905 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.26□□□□□ -0.29
GDNFP39905 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDNFP39905 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
GDNFP39905 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.26□□□□□ -0.29
GDNFP39905 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
GDNFP39905 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
GDNFP39905 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GDNFP39905 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.25□□□□□ -0.29
GDNFP39905 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GDNFP39905 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GDNFP39905 AL136982.4-201ENST00000437689 1740 ntBASIC13.25□□□□□ -0.29
GDNFP39905 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GDNFP39905 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.25□□□□□ -0.29
GDNFP39905 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
GDNFP39905 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GDNFP39905 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
GDNFP39905 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GDNFP39905 AC138969.3-201ENST00000546612 1459 ntBASIC13.25□□□□□ -0.29
GDNFP39905 AC138932.2-201ENST00000548268 1459 ntBASIC13.25□□□□□ -0.29
GDNFP39905 AC126755.4-201ENST00000549796 1459 ntBASIC13.25□□□□□ -0.29
GDNFP39905 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.25□□□□□ -0.29
GDNFP39905 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GDNFP39905 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
GDNFP39905 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
GDNFP39905 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GDNFP39905 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GDNFP39905 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
GDNFP39905 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
GDNFP39905 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GDNFP39905 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GDNFP39905 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
GDNFP39905 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GDNFP39905 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.25□□□□□ -0.29
GDNFP39905 AC254562.1-201ENST00000417586 456 ntBASIC13.25□□□□□ -0.29
GDNFP39905 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.25□□□□□ -0.29
GDNFP39905 SPDYE14P-201ENST00000442619 822 ntBASIC13.25□□□□□ -0.29
GDNFP39905 DNAJB3-202ENST00000449667 1266 ntBASIC13.25□□□□□ -0.29
GDNFP39905 AC023141.5-201ENST00000458585 616 ntBASIC13.25□□□□□ -0.29
GDNFP39905 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.25□□□□□ -0.29
GDNFP39905 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.25□□□□□ -0.29
GDNFP39905 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.25□□□□□ -0.29
GDNFP39905 HNRNPUP1-201ENST00000554987 333 ntBASIC13.25□□□□□ -0.29
GDNFP39905 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms