Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
USP6P35125 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC20■□□□□ 0.79
USP6P35125 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
USP6P35125 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
USP6P35125 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
USP6P35125 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP6P35125 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP6P35125 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP6P35125 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC20■□□□□ 0.79
USP6P35125 AL512430.1-201ENST00000392575 860 ntBASIC20■□□□□ 0.79
USP6P35125 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC20■□□□□ 0.79
USP6P35125 RPS9P1-201ENST00000419943 583 ntBASIC20■□□□□ 0.79
USP6P35125 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC20■□□□□ 0.79
USP6P35125 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC20■□□□□ 0.79
USP6P35125 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC20■□□□□ 0.79
USP6P35125 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP6P35125 TPM1-223ENST00000560445 485 ntTSL 3 BASIC20■□□□□ 0.79
USP6P35125 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP6P35125 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC20■□□□□ 0.79
USP6P35125 MIR4522-201ENST00000584932 87 ntBASIC20■□□□□ 0.79
USP6P35125 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC20■□□□□ 0.79
USP6P35125 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC20■□□□□ 0.79
USP6P35125 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
USP6P35125 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP6P35125 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP6P35125 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC19.99■□□□□ 0.79
USP6P35125 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP6P35125 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC19.99■□□□□ 0.79
USP6P35125 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.99■□□□□ 0.79
USP6P35125 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP6P35125 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP6P35125 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC19.99■□□□□ 0.79
USP6P35125 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP6P35125 AP000356.3-201ENST00000382243 753 ntBASIC19.99■□□□□ 0.79
USP6P35125 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP6P35125 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC19.99■□□□□ 0.79
USP6P35125 DUTP3-201ENST00000450025 415 ntBASIC19.99■□□□□ 0.79
USP6P35125 AC130709.1-201ENST00000484779 1212 ntBASIC19.99■□□□□ 0.79
USP6P35125 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC19.99■□□□□ 0.79
USP6P35125 IGHVIII-5-2-201ENST00000522505 261 ntBASIC19.99■□□□□ 0.79
USP6P35125 PGAM1P5-201ENST00000548011 764 ntBASIC19.99■□□□□ 0.79
USP6P35125 DNM1P30-201ENST00000563586 452 ntBASIC19.99■□□□□ 0.79
USP6P35125 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC19.99■□□□□ 0.79
USP6P35125 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP6P35125 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
USP6P35125 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP6P35125 AL136172.1-201ENST00000598590 1394 ntBASIC19.99■□□□□ 0.79
USP6P35125 AC008894.3-201ENST00000624324 3103 ntBASIC19.99■□□□□ 0.79
USP6P35125 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP6P35125 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP6P35125 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP6P35125 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP6P35125 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP6P35125 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP6P35125 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.98■□□□□ 0.79
USP6P35125 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC19.98■□□□□ 0.79
USP6P35125 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP6P35125 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC19.98■□□□□ 0.79
USP6P35125 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.98■□□□□ 0.79
USP6P35125 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.98■□□□□ 0.79
USP6P35125 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.98■□□□□ 0.79
USP6P35125 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP6P35125 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC19.98■□□□□ 0.79
USP6P35125 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP6P35125 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP6P35125 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP6P35125 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP6P35125 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP6P35125 AL627389.1-201ENST00000413508 1182 ntBASIC19.98■□□□□ 0.79
USP6P35125 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP6P35125 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USP6P35125 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC19.98■□□□□ 0.79
USP6P35125 RPSAP15-201ENST00000448168 861 ntBASIC19.98■□□□□ 0.79
USP6P35125 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC19.98■□□□□ 0.79
USP6P35125 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC19.98■□□□□ 0.79
USP6P35125 AP002803.1-201ENST00000528836 498 ntBASIC19.98■□□□□ 0.79
USP6P35125 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC19.98■□□□□ 0.79
USP6P35125 AL031713.1-201ENST00000564813 661 ntBASIC19.98■□□□□ 0.79
USP6P35125 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC19.98■□□□□ 0.79
USP6P35125 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP6P35125 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
USP6P35125 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC19.98■□□□□ 0.79
USP6P35125 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC19.98■□□□□ 0.79
USP6P35125 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC19.98■□□□□ 0.79
USP6P35125 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
USP6P35125 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
USP6P35125 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC19.98■□□□□ 0.79
USP6P35125 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP6P35125 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP6P35125 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
USP6P35125 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
USP6P35125 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC19.98■□□□□ 0.79
USP6P35125 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
USP6P35125 AC007950.2-201ENST00000615045 2347 ntBASIC19.97■□□□□ 0.79
USP6P35125 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
USP6P35125 AC139712.1-201ENST00000378256 1875 ntBASIC19.97■□□□□ 0.79
USP6P35125 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.97■□□□□ 0.79
USP6P35125 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.97■□□□□ 0.79
USP6P35125 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
USP6P35125 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms