Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC8P31273 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HOXC8P31273 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
HOXC8P31273 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HOXC8P31273 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.21■□□□□ 0.18
HOXC8P31273 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.21■□□□□ 0.18
HOXC8P31273 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.21■□□□□ 0.18
HOXC8P31273 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HOXC8P31273 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HOXC8P31273 AL162727.3-201ENST00000635661 2787 ntBASIC16.21■□□□□ 0.18
HOXC8P31273 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HOXC8P31273 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
HOXC8P31273 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC8P31273 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.2■□□□□ 0.18
HOXC8P31273 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC8P31273 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HOXC8P31273 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.2■□□□□ 0.18
HOXC8P31273 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC8P31273 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC8P31273 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC8P31273 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC8P31273 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC8P31273 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.2■□□□□ 0.18
HOXC8P31273 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.2■□□□□ 0.18
HOXC8P31273 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.2■□□□□ 0.18
HOXC8P31273 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.2■□□□□ 0.18
HOXC8P31273 AC026320.2-201ENST00000434379 478 ntBASIC16.2■□□□□ 0.18
HOXC8P31273 AC098935.1-201ENST00000446057 611 ntBASIC16.2■□□□□ 0.18
HOXC8P31273 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.2■□□□□ 0.18
HOXC8P31273 RN7SL181P-201ENST00000462921 277 ntBASIC16.2■□□□□ 0.18
HOXC8P31273 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC8P31273 AC104784.1-201ENST00000473096 294 ntBASIC16.2■□□□□ 0.18
HOXC8P31273 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.2■□□□□ 0.18
HOXC8P31273 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.2■□□□□ 0.18
HOXC8P31273 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.2■□□□□ 0.18
HOXC8P31273 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.2■□□□□ 0.18
HOXC8P31273 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HOXC8P31273 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.2■□□□□ 0.18
HOXC8P31273 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.2■□□□□ 0.18
HOXC8P31273 U62317.3-201ENST00000608319 855 ntBASIC16.2■□□□□ 0.18
HOXC8P31273 MIR6769A-201ENST00000617340 73 ntBASIC16.2■□□□□ 0.18
HOXC8P31273 AC092299.1-201ENST00000632679 757 ntBASIC16.2■□□□□ 0.18
HOXC8P31273 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
HOXC8P31273 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC8P31273 OR6D1P-202ENST00000641007 5290 ntBASIC16.2■□□□□ 0.18
HOXC8P31273 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC8P31273 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.2■□□□□ 0.18
HOXC8P31273 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.2■□□□□ 0.18
HOXC8P31273 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC8P31273 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC8P31273 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC8P31273 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HOXC8P31273 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC8P31273 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC8P31273 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HOXC8P31273 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC8P31273 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.19■□□□□ 0.18
HOXC8P31273 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC8P31273 AC092135.3-201ENST00000624151 1846 ntBASIC16.19■□□□□ 0.18
HOXC8P31273 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC8P31273 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.19■□□□□ 0.18
HOXC8P31273 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC8P31273 AC139712.1-201ENST00000378256 1875 ntBASIC16.19■□□□□ 0.18
HOXC8P31273 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC8P31273 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.19■□□□□ 0.18
HOXC8P31273 AL627231.1-201ENST00000394467 1125 ntBASIC16.19■□□□□ 0.18
HOXC8P31273 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC8P31273 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC8P31273 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.19■□□□□ 0.18
HOXC8P31273 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.19■□□□□ 0.18
HOXC8P31273 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.19■□□□□ 0.18
HOXC8P31273 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HOXC8P31273 AC130709.1-201ENST00000484779 1212 ntBASIC16.19■□□□□ 0.18
HOXC8P31273 NDUFS6P1-201ENST00000485187 316 ntBASIC16.19■□□□□ 0.18
HOXC8P31273 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HOXC8P31273 NPM1P43-201ENST00000558669 786 ntBASIC16.19■□□□□ 0.18
HOXC8P31273 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.19■□□□□ 0.18
HOXC8P31273 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.19■□□□□ 0.18
HOXC8P31273 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.19■□□□□ 0.18
HOXC8P31273 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.19■□□□□ 0.18
HOXC8P31273 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC8P31273 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC8P31273 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC8P31273 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HOXC8P31273 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.19■□□□□ 0.18
HOXC8P31273 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC8P31273 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC8P31273 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HOXC8P31273 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC8P31273 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.19■□□□□ 0.18
HOXC8P31273 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC8P31273 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC8P31273 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HOXC8P31273 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC8P31273 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.18■□□□□ 0.18
HOXC8P31273 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC8P31273 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC8P31273 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.18■□□□□ 0.18
HOXC8P31273 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HOXC8P31273 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms