Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NCK1P16333 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCK1P16333 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCK1P16333 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCK1P16333 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NCK1P16333 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.35□□□□□ -0.11
NCK1P16333 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.35□□□□□ -0.11
NCK1P16333 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NCK1P16333 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
NCK1P16333 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NCK1P16333 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.35□□□□□ -0.11
NCK1P16333 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
NCK1P16333 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCK1P16333 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCK1P16333 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.35□□□□□ -0.11
NCK1P16333 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
NCK1P16333 AL157414.3-201ENST00000624276 1954 ntBASIC14.35□□□□□ -0.11
NCK1P16333 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCK1P16333 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCK1P16333 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.35□□□□□ -0.11
NCK1P16333 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NCK1P16333 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.35□□□□□ -0.11
NCK1P16333 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.35□□□□□ -0.11
NCK1P16333 TPT1P11-201ENST00000458482 498 ntBASIC14.35□□□□□ -0.11
NCK1P16333 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.35□□□□□ -0.11
NCK1P16333 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.35□□□□□ -0.11
NCK1P16333 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCK1P16333 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.35□□□□□ -0.11
NCK1P16333 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.35□□□□□ -0.11
NCK1P16333 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCK1P16333 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCK1P16333 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.35□□□□□ -0.11
NCK1P16333 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.35□□□□□ -0.11
NCK1P16333 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NCK1P16333 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCK1P16333 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCK1P16333 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCK1P16333 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
NCK1P16333 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCK1P16333 AL354702.1-201ENST00000442006 1960 ntBASIC14.34□□□□□ -0.11
NCK1P16333 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NCK1P16333 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
NCK1P16333 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NCK1P16333 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.34□□□□□ -0.11
NCK1P16333 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NCK1P16333 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NCK1P16333 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NCK1P16333 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NCK1P16333 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NCK1P16333 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NCK1P16333 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.34□□□□□ -0.11
NCK1P16333 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NCK1P16333 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NCK1P16333 KRT18P32-201ENST00000424695 1287 ntBASIC14.34□□□□□ -0.11
NCK1P16333 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.34□□□□□ -0.11
NCK1P16333 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NCK1P16333 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.34□□□□□ -0.11
NCK1P16333 AC022447.6-201ENST00000515522 438 ntBASIC14.34□□□□□ -0.11
NCK1P16333 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.34□□□□□ -0.11
NCK1P16333 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.34□□□□□ -0.11
NCK1P16333 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NCK1P16333 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NCK1P16333 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.34□□□□□ -0.11
NCK1P16333 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.34□□□□□ -0.11
NCK1P16333 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.34□□□□□ -0.11
NCK1P16333 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.34□□□□□ -0.11
NCK1P16333 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
NCK1P16333 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NCK1P16333 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.34□□□□□ -0.11
NCK1P16333 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.34□□□□□ -0.11
NCK1P16333 Z97205.2-201ENST00000564697 1639 ntBASIC14.33□□□□□ -0.11
NCK1P16333 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms