Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.11■□□□□ 0.01
LDB2O43679 AC134312.5-201ENST00000568031 1313 ntBASIC15.11■□□□□ 0.01
LDB2O43679 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LDB2O43679 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LDB2O43679 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.11■□□□□ 0.01
LDB2O43679 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.11■□□□□ 0.01
LDB2O43679 AC067930.6-201ENST00000623257 4947 ntBASIC15.11■□□□□ 0.01
LDB2O43679 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
LDB2O43679 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LDB2O43679 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LDB2O43679 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.1■□□□□ 0.01
LDB2O43679 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.1■□□□□ 0.01
LDB2O43679 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LDB2O43679 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
LDB2O43679 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
LDB2O43679 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LDB2O43679 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.1■□□□□ 0.01
LDB2O43679 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LDB2O43679 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.1■□□□□ 0.01
LDB2O43679 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LDB2O43679 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LDB2O43679 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
LDB2O43679 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LDB2O43679 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.1■□□□□ 0.01
LDB2O43679 AC068587.3-201ENST00000526613 355 ntBASIC15.1■□□□□ 0.01
LDB2O43679 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
LDB2O43679 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.1■□□□□ 0.01
LDB2O43679 PTP4A1P2-201ENST00000546033 454 ntBASIC15.1■□□□□ 0.01
LDB2O43679 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.1■□□□□ 0.01
LDB2O43679 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LDB2O43679 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
LDB2O43679 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
LDB2O43679 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LDB2O43679 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
LDB2O43679 AC023908.3-201ENST00000564211 3047 ntBASIC15.1■□□□□ 0.01
LDB2O43679 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.1■□□□□ 0.01
LDB2O43679 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LDB2O43679 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.1■□□□□ 0.01
LDB2O43679 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
LDB2O43679 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LDB2O43679 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LDB2O43679 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.1■□□□□ 0.01
LDB2O43679 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LDB2O43679 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LDB2O43679 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LDB2O43679 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
LDB2O43679 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LDB2O43679 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
LDB2O43679 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LDB2O43679 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LDB2O43679 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LDB2O43679 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.09■□□□□ 0.01
LDB2O43679 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LDB2O43679 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LDB2O43679 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LDB2O43679 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LDB2O43679 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LDB2O43679 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LDB2O43679 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LDB2O43679 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LDB2O43679 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LDB2O43679 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LDB2O43679 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.09■□□□□ 0.01
LDB2O43679 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.09■□□□□ 0.01
LDB2O43679 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LDB2O43679 NME2P1-201ENST00000426182 414 ntBASIC15.09■□□□□ 0.01
LDB2O43679 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LDB2O43679 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.09■□□□□ 0.01
LDB2O43679 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.09■□□□□ 0.01
LDB2O43679 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.09■□□□□ 0.01
LDB2O43679 KRT17P7-201ENST00000451704 1104 ntBASIC15.09■□□□□ 0.01
LDB2O43679 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.09■□□□□ 0.01
LDB2O43679 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.09■□□□□ 0.01
LDB2O43679 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LDB2O43679 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
LDB2O43679 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
LDB2O43679 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.09■□□□□ 0.01
LDB2O43679 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LDB2O43679 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LDB2O43679 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
LDB2O43679 AC145423.3-201ENST00000615987 467 ntBASIC15.09■□□□□ 0.01
LDB2O43679 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.09■□□□□ 0.01
LDB2O43679 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LDB2O43679 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LDB2O43679 AC005912.2-201ENST00000619492 2400 ntBASIC15.09■□□□□ 0.01
LDB2O43679 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LDB2O43679 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LDB2O43679 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LDB2O43679 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LDB2O43679 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LDB2O43679 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
LDB2O43679 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LDB2O43679 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.09■□□□□ 0.01
LDB2O43679 AL138709.1-201ENST00000614840 1693 ntBASIC15.09■□□□□ 0.01
LDB2O43679 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LDB2O43679 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
LDB2O43679 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LDB2O43679 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.09■□□□□ 0.01
LDB2O43679 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
LDB2O43679 AC063926.3-201ENST00000624734 5658 ntBASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms