Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
MSH5O43196 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC21.45■■□□□ 1.02
MSH5O43196 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MSH5O43196 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MSH5O43196 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MSH5O43196 NARF-206ENST00000457415 1668 ntTSL 5 BASIC21.45■■□□□ 1.02
MSH5O43196 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MSH5O43196 AC098614.1-201ENST00000368528 745 ntBASIC21.45■■□□□ 1.02
MSH5O43196 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MSH5O43196 DYNC2LI1-204ENST00000406852 1133 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MSH5O43196 HNF4GP1-201ENST00000430567 1249 ntBASIC21.45■■□□□ 1.02
MSH5O43196 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC21.45■■□□□ 1.02
MSH5O43196 AL139220.1-201ENST00000436802 520 ntBASIC21.45■■□□□ 1.02
MSH5O43196 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
MSH5O43196 ZNF101-204ENST00000444249 1152 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MSH5O43196 AL451063.1-201ENST00000450164 1133 ntBASIC21.45■■□□□ 1.02
MSH5O43196 SEPT7P3-201ENST00000455017 621 ntBASIC21.45■■□□□ 1.02
MSH5O43196 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC21.45■■□□□ 1.02
MSH5O43196 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC21.45■■□□□ 1.02
MSH5O43196 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC21.45■■□□□ 1.02
MSH5O43196 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MSH5O43196 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC21.45■■□□□ 1.02
MSH5O43196 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC21.45■■□□□ 1.02
MSH5O43196 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
MSH5O43196 LINC02455-201ENST00000541881 496 ntTSL 3 BASIC21.45■■□□□ 1.02
MSH5O43196 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC21.45■■□□□ 1.02
MSH5O43196 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC21.45■■□□□ 1.02
MSH5O43196 AL606495.2-201ENST00000605867 535 ntBASIC21.45■■□□□ 1.02
MSH5O43196 AL031055.1-201ENST00000606362 631 ntBASIC21.45■■□□□ 1.02
MSH5O43196 GPER1-207ENST00000619052 571 ntTSL 2 BASIC21.45■■□□□ 1.02
MSH5O43196 IGHV3-72-202ENST00000621503 303 ntBASIC21.45■■□□□ 1.02
MSH5O43196 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC21.45■■□□□ 1.02
MSH5O43196 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MSH5O43196 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.45■■□□□ 1.02
MSH5O43196 AC105053.1-201ENST00000366278 1711 ntTSL 2 BASIC21.45■■□□□ 1.02
MSH5O43196 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MSH5O43196 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MSH5O43196 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MSH5O43196 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
MSH5O43196 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MSH5O43196 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MSH5O43196 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC21.45■■□□□ 1.02
MSH5O43196 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
MSH5O43196 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
MSH5O43196 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MSH5O43196 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MSH5O43196 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC21.45■■□□□ 1.02
MSH5O43196 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MSH5O43196 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MSH5O43196 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MSH5O43196 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MSH5O43196 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MSH5O43196 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
MSH5O43196 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
MSH5O43196 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MSH5O43196 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MSH5O43196 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC21.44■■□□□ 1.02
MSH5O43196 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
MSH5O43196 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MSH5O43196 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MSH5O43196 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MSH5O43196 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MSH5O43196 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MSH5O43196 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MSH5O43196 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MSH5O43196 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC21.44■■□□□ 1.02
MSH5O43196 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
MSH5O43196 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MSH5O43196 MIR658-201ENST00000385210 100 ntBASIC21.44■■□□□ 1.02
MSH5O43196 AC019294.1-201ENST00000395215 1184 ntTSL 2 BASIC21.44■■□□□ 1.02
MSH5O43196 RN7SKP112-201ENST00000411213 318 ntBASIC21.44■■□□□ 1.02
MSH5O43196 AL353779.1-201ENST00000434793 351 ntBASIC21.44■■□□□ 1.02
MSH5O43196 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC21.44■■□□□ 1.02
MSH5O43196 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC21.44■■□□□ 1.02
MSH5O43196 AC023590.1-203ENST00000449065 411 ntTSL 3 BASIC21.44■■□□□ 1.02
MSH5O43196 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC21.44■■□□□ 1.02
MSH5O43196 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC21.44■■□□□ 1.02
MSH5O43196 AC022294.1-201ENST00000460993 865 ntTSL 3 BASIC21.44■■□□□ 1.02
MSH5O43196 RN7SL752P-201ENST00000463779 287 ntBASIC21.44■■□□□ 1.02
MSH5O43196 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
MSH5O43196 AC017091.1-201ENST00000513551 1061 ntTSL 5 BASIC21.44■■□□□ 1.02
MSH5O43196 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC21.44■■□□□ 1.02
MSH5O43196 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC21.44■■□□□ 1.02
MSH5O43196 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC21.44■■□□□ 1.02
MSH5O43196 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
MSH5O43196 AC112236.1-201ENST00000561977 1098 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MSH5O43196 RARRES2P9-201ENST00000565168 469 ntBASIC21.44■■□□□ 1.02
MSH5O43196 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.44■■□□□ 1.02
MSH5O43196 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
MSH5O43196 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC21.44■■□□□ 1.02
MSH5O43196 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC21.44■■□□□ 1.02
MSH5O43196 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MSH5O43196 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC21.44■■□□□ 1.02
MSH5O43196 NKG7-205ENST00000600427 520 ntTSL 3 BASIC21.44■■□□□ 1.02
MSH5O43196 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MSH5O43196 UBXN8-207ENST00000615729 702 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MSH5O43196 LINC01451-201ENST00000623792 534 ntBASIC21.44■■□□□ 1.02
MSH5O43196 AP000676.4-201ENST00000624659 623 ntBASIC21.44■■□□□ 1.02
MSH5O43196 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC21.44■■□□□ 1.02
MSH5O43196 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms