Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN1O15353 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN1O15353 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18■□□□□ 0.47
FOXN1O15353 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN1O15353 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
FOXN1O15353 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18■□□□□ 0.47
FOXN1O15353 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
FOXN1O15353 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXN1O15353 AL133267.1-201ENST00000398220 340 ntBASIC18■□□□□ 0.47
FOXN1O15353 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN1O15353 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXN1O15353 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC18■□□□□ 0.47
FOXN1O15353 AP002803.1-201ENST00000528836 498 ntBASIC18■□□□□ 0.47
FOXN1O15353 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC18■□□□□ 0.47
FOXN1O15353 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18■□□□□ 0.47
FOXN1O15353 EID1-202ENST00000560490 584 ntTSL 3 BASIC18■□□□□ 0.47
FOXN1O15353 AL118516.1-201ENST00000564152 670 ntBASIC18■□□□□ 0.47
FOXN1O15353 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC18■□□□□ 0.47
FOXN1O15353 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN1O15353 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC18■□□□□ 0.47
FOXN1O15353 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC18■□□□□ 0.47
FOXN1O15353 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
FOXN1O15353 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXN1O15353 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
FOXN1O15353 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18■□□□□ 0.47
FOXN1O15353 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN1O15353 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18■□□□□ 0.47
FOXN1O15353 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN1O15353 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN1O15353 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
FOXN1O15353 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXN1O15353 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXN1O15353 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXN1O15353 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXN1O15353 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
FOXN1O15353 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
FOXN1O15353 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
FOXN1O15353 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 AL157791.1-201ENST00000553667 1699 ntBASIC17.99■□□□□ 0.47
FOXN1O15353 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.99■□□□□ 0.47
FOXN1O15353 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
FOXN1O15353 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.99■□□□□ 0.47
FOXN1O15353 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
FOXN1O15353 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.99■□□□□ 0.47
FOXN1O15353 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
FOXN1O15353 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXN1O15353 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
FOXN1O15353 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.99■□□□□ 0.47
FOXN1O15353 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.99■□□□□ 0.47
FOXN1O15353 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.99■□□□□ 0.47
FOXN1O15353 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
FOXN1O15353 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXN1O15353 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.99■□□□□ 0.47
FOXN1O15353 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXN1O15353 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC17.99■□□□□ 0.47
FOXN1O15353 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.99■□□□□ 0.47
FOXN1O15353 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.99■□□□□ 0.47
FOXN1O15353 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.99■□□□□ 0.47
FOXN1O15353 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
FOXN1O15353 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXN1O15353 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
FOXN1O15353 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
FOXN1O15353 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
FOXN1O15353 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FOXN1O15353 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXN1O15353 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.98■□□□□ 0.47
FOXN1O15353 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXN1O15353 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
FOXN1O15353 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXN1O15353 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXN1O15353 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXN1O15353 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.98■□□□□ 0.47
FOXN1O15353 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXN1O15353 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXN1O15353 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.98■□□□□ 0.47
FOXN1O15353 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
FOXN1O15353 AC004987.2-201ENST00000395959 1148 ntBASIC17.98■□□□□ 0.47
FOXN1O15353 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.98■□□□□ 0.47
FOXN1O15353 HPGD-203ENST00000422112 805 ntTSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms