Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SOX1O00570 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.79■□□□□ 0.12
SOX1O00570 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.79■□□□□ 0.12
SOX1O00570 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SOX1O00570 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SOX1O00570 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SOX1O00570 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SOX1O00570 NFIC-211ENST00000641145 8399 ntBASIC15.79■□□□□ 0.12
SOX1O00570 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SOX1O00570 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC15.79■□□□□ 0.12
SOX1O00570 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SOX1O00570 KRT8P30-201ENST00000432100 650 ntBASIC15.79■□□□□ 0.12
SOX1O00570 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.79■□□□□ 0.12
SOX1O00570 CICP12-201ENST00000455801 843 ntBASIC15.79■□□□□ 0.12
SOX1O00570 SCARNA12-201ENST00000459155 270 ntBASIC15.79■□□□□ 0.12
SOX1O00570 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC15.79■□□□□ 0.12
SOX1O00570 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC15.79■□□□□ 0.12
SOX1O00570 ALG1L3P-201ENST00000503331 765 ntBASIC15.79■□□□□ 0.12
SOX1O00570 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SOX1O00570 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC15.79■□□□□ 0.12
SOX1O00570 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SOX1O00570 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.79■□□□□ 0.12
SOX1O00570 AC008972.2-201ENST00000606587 494 ntBASIC15.79■□□□□ 0.12
SOX1O00570 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.79■□□□□ 0.12
SOX1O00570 AC020922.4-201ENST00000621389 339 ntBASIC15.79■□□□□ 0.12
SOX1O00570 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.79■□□□□ 0.12
SOX1O00570 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SOX1O00570 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.79■□□□□ 0.12
SOX1O00570 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SOX1O00570 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SOX1O00570 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SOX1O00570 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SOX1O00570 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SOX1O00570 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SOX1O00570 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SOX1O00570 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SOX1O00570 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SOX1O00570 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SOX1O00570 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SOX1O00570 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SOX1O00570 AL645608.8-201ENST00000606034 2086 ntBASIC15.79■□□□□ 0.12
SOX1O00570 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SOX1O00570 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SOX1O00570 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SOX1O00570 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC15.78■□□□□ 0.12
SOX1O00570 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.78■□□□□ 0.12
SOX1O00570 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.78■□□□□ 0.12
SOX1O00570 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SOX1O00570 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.78■□□□□ 0.12
SOX1O00570 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SOX1O00570 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SOX1O00570 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
SOX1O00570 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.78■□□□□ 0.12
SOX1O00570 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SOX1O00570 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SOX1O00570 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SOX1O00570 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SOX1O00570 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.78■□□□□ 0.12
SOX1O00570 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SOX1O00570 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SOX1O00570 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.78■□□□□ 0.12
SOX1O00570 DKKL1P1-201ENST00000400550 698 ntBASIC15.78■□□□□ 0.12
SOX1O00570 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SOX1O00570 AL121949.3-201ENST00000406684 385 ntBASIC15.78■□□□□ 0.12
SOX1O00570 AC092570.1-201ENST00000414446 469 ntBASIC15.78■□□□□ 0.12
SOX1O00570 AHCYP3-201ENST00000420053 1279 ntBASIC15.78■□□□□ 0.12
SOX1O00570 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.78■□□□□ 0.12
SOX1O00570 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.78■□□□□ 0.12
SOX1O00570 RNA5SP406-201ENST00000516106 112 ntBASIC15.78■□□□□ 0.12
SOX1O00570 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SOX1O00570 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SOX1O00570 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC15.78■□□□□ 0.12
SOX1O00570 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.78■□□□□ 0.12
SOX1O00570 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.78■□□□□ 0.12
SOX1O00570 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SOX1O00570 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
SOX1O00570 AC011477.6-201ENST00000604980 1927 ntBASIC15.78■□□□□ 0.12
SOX1O00570 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SOX1O00570 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SOX1O00570 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SOX1O00570 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SOX1O00570 AC012508.2-201ENST00000567613 1472 ntBASIC15.78■□□□□ 0.12
SOX1O00570 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SOX1O00570 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SOX1O00570 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SOX1O00570 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SOX1O00570 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SOX1O00570 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
SOX1O00570 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SOX1O00570 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SOX1O00570 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SOX1O00570 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SOX1O00570 AL157414.3-201ENST00000624276 1954 ntBASIC15.77■□□□□ 0.12
SOX1O00570 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.77■□□□□ 0.12
SOX1O00570 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SOX1O00570 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
SOX1O00570 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SOX1O00570 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SOX1O00570 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SOX1O00570 KRT18P36-201ENST00000411618 1276 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms