Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 AC232323.1-201ENST00000540724 2099 ntBASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 REXO1L5P-201ENST00000622260 2098 ntBASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 CNN2P8-201ENST00000421872 913 ntBASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 RN7SL560P-201ENST00000577943 264 ntBASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 AL606495.2-201ENST00000605867 535 ntBASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 AC132938.4-201ENST00000623835 848 ntBASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.94□□□□□ -0.02
TMX2-CTNND1H3BSU7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 AP001582.1-201ENST00000525856 295 ntBASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 GPR182-203ENST00000622922 591 ntBASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 AC010327.5-201ENST00000586923 3061 ntBASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMX2-CTNND1H3BSU7 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms