Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 TPM4P1-201ENST00000436100 807 ntBASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 AC022447.6-201ENST00000515522 438 ntBASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 SLC25A1P1-201ENST00000528351 927 ntBASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 KRT126P-201ENST00000549467 1181 ntBASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 SAMD11P1-201ENST00000571429 661 ntBASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 TP73-209ENST00000603362 1668 ntTSL 5 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
UBE2D4Q9Y2X8 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
UBE2D4Q9Y2X8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 AL121723.1-201ENST00000445194 1519 ntBASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 AC018665.1-201ENST00000622927 1362 ntBASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 SERBP1P3-201ENST00000459980 809 ntBASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC10.58□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms