Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 RRP36-201ENST00000244496 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 CLNS1A-201ENST00000263309 1172 ntTSL 3 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 AC104297.1-201ENST00000393779 870 ntBASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 AL109755.1-201ENST00000401791 649 ntBASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 HNRNPH1P1-201ENST00000403291 1185 ntBASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 RNU2-62P-201ENST00000410868 191 ntBASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 CEACAMP8-201ENST00000413902 580 ntBASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 AC114482.1-201ENST00000418010 247 ntBASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 AC009965.2-201ENST00000425328 970 ntBASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 MTCYBP9-201ENST00000431021 303 ntBASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 AC140076.1-201ENST00000449897 361 ntBASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 MTND1P16-201ENST00000465177 898 ntBASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 YBX1P2-201ENST00000489612 999 ntBASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 AC100849.1-202ENST00000517949 562 ntTSL 3 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 CLNS1A-202ENST00000525064 1121 ntTSL 3 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 DDIT3-205ENST00000552740 951 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 SCOCP1-201ENST00000554676 349 ntBASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 AC091544.2-201ENST00000555864 414 ntTSL 3 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 AC135068.5-201ENST00000624197 983 ntBASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 SEC62-207ENST00000480708 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 NEK2P4-201ENST00000425793 1329 ntBASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
KRTAP3-3Q9BYR6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC9.77□□□□□ -0.84
KRTAP3-3Q9BYR6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
KRTAP3-3Q9BYR6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
KRTAP3-3Q9BYR6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
KRTAP3-3Q9BYR6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 RPL13AP17-204ENST00000450028 1895 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AL445250.1-204ENST00000641775 1723 ntBASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
KRTAP3-3Q9BYR6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms