Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 FZD10-202ENST00000539839 3282 ntBASIC19.41■□□□□ 0.7
ABCA3Q99758 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCA3Q99758 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCA3Q99758 AC019109.1-201ENST00000401725 1874 ntBASIC19.41■□□□□ 0.7
ABCA3Q99758 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCA3Q99758 LINC01101-201ENST00000622953 1884 ntBASIC19.41■□□□□ 0.7
ABCA3Q99758 AC021305.1-201ENST00000520656 1514 ntBASIC19.41■□□□□ 0.7
ABCA3Q99758 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC19.41■□□□□ 0.7
ABCA3Q99758 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC19.41■□□□□ 0.7
ABCA3Q99758 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC19.41■□□□□ 0.7
ABCA3Q99758 MIR1301-201ENST00000408518 82 ntBASIC19.41■□□□□ 0.7
ABCA3Q99758 RN7SL582P-201ENST00000491078 279 ntBASIC19.41■□□□□ 0.7
ABCA3Q99758 AC092862.1-201ENST00000541534 533 ntBASIC19.41■□□□□ 0.7
ABCA3Q99758 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC19.41■□□□□ 0.7
ABCA3Q99758 CYP4F36P-201ENST00000589193 186 ntBASIC19.41■□□□□ 0.7
ABCA3Q99758 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
ABCA3Q99758 TP53-221ENST00000615910 1149 ntTSL 5 BASIC19.41■□□□□ 0.7
ABCA3Q99758 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC19.41■□□□□ 0.7
ABCA3Q99758 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCA3Q99758 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCA3Q99758 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCA3Q99758 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.41■□□□□ 0.7
ABCA3Q99758 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC19.41■□□□□ 0.7
ABCA3Q99758 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCA3Q99758 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCA3Q99758 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC19.41■□□□□ 0.7
ABCA3Q99758 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCA3Q99758 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ABCA3Q99758 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.41■□□□□ 0.7
ABCA3Q99758 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ABCA3Q99758 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ABCA3Q99758 PIFO-201ENST00000369737 746 ntTSL 2 BASIC19.4■□□□□ 0.7
ABCA3Q99758 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ABCA3Q99758 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC19.4■□□□□ 0.7
ABCA3Q99758 AC006529.1-201ENST00000459978 637 ntBASIC19.4■□□□□ 0.7
ABCA3Q99758 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC19.4■□□□□ 0.7
ABCA3Q99758 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCA3Q99758 APOC1-209ENST00000592885 562 ntTSL 3 BASIC19.4■□□□□ 0.7
ABCA3Q99758 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCA3Q99758 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.4■□□□□ 0.7
ABCA3Q99758 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
ABCA3Q99758 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.4■□□□□ 0.7
ABCA3Q99758 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ABCA3Q99758 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCA3Q99758 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
ABCA3Q99758 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ABCA3Q99758 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ABCA3Q99758 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCA3Q99758 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
ABCA3Q99758 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC19.39■□□□□ 0.7
ABCA3Q99758 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC19.39■□□□□ 0.7
ABCA3Q99758 HNRNPA1P58-201ENST00000403629 610 ntBASIC19.39■□□□□ 0.7
ABCA3Q99758 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC19.39■□□□□ 0.7
ABCA3Q99758 AL512599.1-201ENST00000430724 685 ntBASIC19.39■□□□□ 0.7
ABCA3Q99758 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ABCA3Q99758 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC19.39■□□□□ 0.7
ABCA3Q99758 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
ABCA3Q99758 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC19.39■□□□□ 0.7
ABCA3Q99758 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.7
ABCA3Q99758 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC19.39■□□□□ 0.7
ABCA3Q99758 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC19.39■□□□□ 0.7
ABCA3Q99758 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC19.39■□□□□ 0.7
ABCA3Q99758 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC19.39■□□□□ 0.7
ABCA3Q99758 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
ABCA3Q99758 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ABCA3Q99758 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.7
ABCA3Q99758 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ABCA3Q99758 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ABCA3Q99758 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC19.39■□□□□ 0.69
ABCA3Q99758 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ABCA3Q99758 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ABCA3Q99758 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.39■□□□□ 0.69
ABCA3Q99758 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC19.39■□□□□ 0.69
ABCA3Q99758 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC19.39■□□□□ 0.69
ABCA3Q99758 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC19.39■□□□□ 0.69
ABCA3Q99758 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.39■□□□□ 0.69
ABCA3Q99758 LINC00528-201ENST00000600723 2160 ntBASIC19.39■□□□□ 0.69
ABCA3Q99758 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
ABCA3Q99758 FUCA1P1-201ENST00000374476 1351 ntBASIC19.39■□□□□ 0.69
ABCA3Q99758 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ABCA3Q99758 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ABCA3Q99758 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ABCA3Q99758 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ABCA3Q99758 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ABCA3Q99758 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC19.39■□□□□ 0.69
ABCA3Q99758 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
ABCA3Q99758 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC19.39■□□□□ 0.69
ABCA3Q99758 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC19.39■□□□□ 0.69
ABCA3Q99758 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC19.39■□□□□ 0.69
ABCA3Q99758 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC19.39■□□□□ 0.69
ABCA3Q99758 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC19.39■□□□□ 0.69
ABCA3Q99758 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC19.39■□□□□ 0.69
ABCA3Q99758 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC19.39■□□□□ 0.69
ABCA3Q99758 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ABCA3Q99758 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ABCA3Q99758 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ABCA3Q99758 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.39■□□□□ 0.69
ABCA3Q99758 AC126365.1-201ENST00000578585 1514 ntBASIC19.39■□□□□ 0.69
ABCA3Q99758 AC004554.1-201ENST00000422830 1468 ntBASIC19.38■□□□□ 0.69
ABCA3Q99758 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms