Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CCL13Q99616 KRT8P14-201ENST00000414254 1442 ntBASIC12.71□□□□□ -0.37
CCL13Q99616 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CCL13Q99616 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL13Q99616 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.71□□□□□ -0.37
CCL13Q99616 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CCL13Q99616 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL13Q99616 LILRP1-201ENST00000444199 1370 ntBASIC12.71□□□□□ -0.37
CCL13Q99616 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
CCL13Q99616 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CCL13Q99616 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL13Q99616 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL13Q99616 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.71□□□□□ -0.37
CCL13Q99616 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CCL13Q99616 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CCL13Q99616 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.71□□□□□ -0.37
CCL13Q99616 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL13Q99616 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.71□□□□□ -0.37
CCL13Q99616 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL13Q99616 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CCL13Q99616 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CCL13Q99616 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.37
CCL13Q99616 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CCL13Q99616 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL13Q99616 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CCL13Q99616 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CCL13Q99616 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL13Q99616 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CCL13Q99616 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CCL13Q99616 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CCL13Q99616 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.71□□□□□ -0.37
CCL13Q99616 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CCL13Q99616 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CCL13Q99616 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CCL13Q99616 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CCL13Q99616 AL355864.2-201ENST00000447420 863 ntBASIC12.71□□□□□ -0.37
CCL13Q99616 BCRP2-202ENST00000447763 634 ntBASIC12.71□□□□□ -0.37
CCL13Q99616 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.71□□□□□ -0.37
CCL13Q99616 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.71□□□□□ -0.37
CCL13Q99616 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.71□□□□□ -0.37
CCL13Q99616 BCRP6-201ENST00000510112 632 ntBASIC12.71□□□□□ -0.37
CCL13Q99616 BCRP7-201ENST00000511549 544 ntBASIC12.71□□□□□ -0.37
CCL13Q99616 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CCL13Q99616 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CCL13Q99616 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.71□□□□□ -0.37
CCL13Q99616 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.71□□□□□ -0.37
CCL13Q99616 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.71□□□□□ -0.37
CCL13Q99616 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.71□□□□□ -0.37
CCL13Q99616 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.71□□□□□ -0.37
CCL13Q99616 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CCL13Q99616 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.71□□□□□ -0.37
CCL13Q99616 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CCL13Q99616 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.71□□□□□ -0.37
CCL13Q99616 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.71□□□□□ -0.37
CCL13Q99616 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCL13Q99616 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCL13Q99616 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.71□□□□□ -0.38
CCL13Q99616 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
CCL13Q99616 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCL13Q99616 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.71□□□□□ -0.38
CCL13Q99616 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCL13Q99616 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
CCL13Q99616 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CCL13Q99616 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
CCL13Q99616 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.71□□□□□ -0.38
CCL13Q99616 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.71□□□□□ -0.38
CCL13Q99616 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCL13Q99616 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL13Q99616 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.7□□□□□ -0.38
CCL13Q99616 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CCL13Q99616 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CCL13Q99616 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL13Q99616 AC063926.2-201ENST00000623766 1308 ntBASIC12.7□□□□□ -0.38
CCL13Q99616 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.7□□□□□ -0.38
CCL13Q99616 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 AC011270.2-201ENST00000624293 2550 ntBASIC12.7□□□□□ -0.38
CCL13Q99616 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
CCL13Q99616 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL13Q99616 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.7□□□□□ -0.38
CCL13Q99616 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.7□□□□□ -0.38
CCL13Q99616 AC022616.1-201ENST00000518688 554 ntBASIC12.7□□□□□ -0.38
CCL13Q99616 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.7□□□□□ -0.38
CCL13Q99616 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.7□□□□□ -0.38
CCL13Q99616 AP001889.1-201ENST00000525414 633 ntBASIC12.7□□□□□ -0.38
CCL13Q99616 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.7□□□□□ -0.38
CCL13Q99616 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
CCL13Q99616 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL13Q99616 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms