Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 AC010141.1-201ENST00000411585 623 ntBASIC16.16■□□□□ 0.18
YME1L1Q96TA2 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 AC242376.1-201ENST00000559033 726 ntBASIC16.16■□□□□ 0.18
YME1L1Q96TA2 AC073352.2-201ENST00000609385 439 ntBASIC16.16■□□□□ 0.18
YME1L1Q96TA2 AC103691.2-201ENST00000618824 433 ntBASIC16.16■□□□□ 0.18
YME1L1Q96TA2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 AL137783.1-201ENST00000623494 1896 ntBASIC16.16■□□□□ 0.18
YME1L1Q96TA2 AC020910.5-201ENST00000623668 1865 ntBASIC16.16■□□□□ 0.18
YME1L1Q96TA2 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 AC011840.2-201ENST00000563063 1520 ntBASIC16.15■□□□□ 0.18
YME1L1Q96TA2 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 AC026316.1-201ENST00000398900 414 ntBASIC16.15■□□□□ 0.18
YME1L1Q96TA2 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 AC012441.2-201ENST00000444843 739 ntBASIC16.15■□□□□ 0.18
YME1L1Q96TA2 AC098935.1-201ENST00000446057 611 ntBASIC16.15■□□□□ 0.18
YME1L1Q96TA2 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 AC009779.1-201ENST00000551138 283 ntBASIC16.15■□□□□ 0.18
YME1L1Q96TA2 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.15■□□□□ 0.18
YME1L1Q96TA2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
YME1L1Q96TA2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
YME1L1Q96TA2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
YME1L1Q96TA2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
YME1L1Q96TA2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YME1L1Q96TA2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.14■□□□□ 0.17
YME1L1Q96TA2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.14■□□□□ 0.17
YME1L1Q96TA2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YME1L1Q96TA2 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
YME1L1Q96TA2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YME1L1Q96TA2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
YME1L1Q96TA2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
YME1L1Q96TA2 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YME1L1Q96TA2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
YME1L1Q96TA2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
YME1L1Q96TA2 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
YME1L1Q96TA2 TBC1D3J-201ENST00000620719 1426 ntBASIC16.14■□□□□ 0.17
YME1L1Q96TA2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
YME1L1Q96TA2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
YME1L1Q96TA2 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.14■□□□□ 0.17
YME1L1Q96TA2 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YME1L1Q96TA2 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
YME1L1Q96TA2 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
YME1L1Q96TA2 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
YME1L1Q96TA2 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.14■□□□□ 0.17
YME1L1Q96TA2 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.14■□□□□ 0.17
YME1L1Q96TA2 AC073150.1-201ENST00000450406 1084 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms