Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP47Q96K76 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
USP47Q96K76 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC21.01■□□□□ 0.95
USP47Q96K76 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
USP47Q96K76 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
USP47Q96K76 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP47Q96K76 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC21.01■□□□□ 0.95
USP47Q96K76 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC21.01■□□□□ 0.95
USP47Q96K76 EEF1DP1-201ENST00000585891 896 ntBASIC21.01■□□□□ 0.95
USP47Q96K76 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC21.01■□□□□ 0.95
USP47Q96K76 AC002472.3-201ENST00000640124 621 ntBASIC21.01■□□□□ 0.95
USP47Q96K76 ING5-213ENST00000636051 4199 ntTSL 5 BASIC21.01■□□□□ 0.95
USP47Q96K76 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP47Q96K76 MX1-218ENST00000619682 1980 ntTSL 5 BASIC21.01■□□□□ 0.95
USP47Q96K76 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP47Q96K76 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP47Q96K76 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC21.01■□□□□ 0.95
USP47Q96K76 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC21.01■□□□□ 0.95
USP47Q96K76 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
USP47Q96K76 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
USP47Q96K76 MYB-242ENST00000618728 3545 ntTSL 5 BASIC21.01■□□□□ 0.95
USP47Q96K76 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP47Q96K76 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP47Q96K76 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP47Q96K76 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC21.01■□□□□ 0.95
USP47Q96K76 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP47Q96K76 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC21.01■□□□□ 0.95
USP47Q96K76 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP47Q96K76 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP47Q96K76 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC21.01■□□□□ 0.95
USP47Q96K76 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP47Q96K76 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP47Q96K76 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP47Q96K76 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP47Q96K76 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP47Q96K76 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
USP47Q96K76 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC21■□□□□ 0.95
USP47Q96K76 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
USP47Q96K76 AL355994.2-201ENST00000447882 704 ntBASIC21■□□□□ 0.95
USP47Q96K76 HOMER2P2-201ENST00000451621 847 ntBASIC21■□□□□ 0.95
USP47Q96K76 NCK2-206ENST00000522586 490 ntTSL 5 BASIC21■□□□□ 0.95
USP47Q96K76 ACR-203ENST00000529621 708 ntTSL 5 BASIC21■□□□□ 0.95
USP47Q96K76 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC21■□□□□ 0.95
USP47Q96K76 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
USP47Q96K76 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC21■□□□□ 0.95
USP47Q96K76 AC103702.1-201ENST00000548801 2630 ntBASIC21■□□□□ 0.95
USP47Q96K76 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
USP47Q96K76 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
USP47Q96K76 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
USP47Q96K76 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC21■□□□□ 0.95
USP47Q96K76 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP47Q96K76 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC21■□□□□ 0.95
USP47Q96K76 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC21■□□□□ 0.95
USP47Q96K76 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
USP47Q96K76 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
USP47Q96K76 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP47Q96K76 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP47Q96K76 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
USP47Q96K76 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP47Q96K76 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC21■□□□□ 0.95
USP47Q96K76 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC21■□□□□ 0.95
USP47Q96K76 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
USP47Q96K76 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC21■□□□□ 0.95
USP47Q96K76 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
USP47Q96K76 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
USP47Q96K76 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP47Q96K76 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC21■□□□□ 0.95
USP47Q96K76 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP47Q96K76 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC21■□□□□ 0.95
USP47Q96K76 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
USP47Q96K76 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC21■□□□□ 0.95
USP47Q96K76 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.99■□□□□ 0.95
USP47Q96K76 AL596257.1-201ENST00000641463 2694 ntBASIC20.99■□□□□ 0.95
USP47Q96K76 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP47Q96K76 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP47Q96K76 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
USP47Q96K76 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
USP47Q96K76 ALG3P1-201ENST00000508806 1114 ntBASIC20.99■□□□□ 0.95
USP47Q96K76 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC20.99■□□□□ 0.95
USP47Q96K76 CYGB-203ENST00000589145 788 ntTSL 3 BASIC20.99■□□□□ 0.95
USP47Q96K76 AC010328.2-201ENST00000597698 1111 ntBASIC20.99■□□□□ 0.95
USP47Q96K76 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP47Q96K76 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP47Q96K76 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC20.99■□□□□ 0.95
USP47Q96K76 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP47Q96K76 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP47Q96K76 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP47Q96K76 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
USP47Q96K76 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP47Q96K76 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
USP47Q96K76 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
USP47Q96K76 TUBB1P2-201ENST00000422712 1306 ntBASIC20.99■□□□□ 0.95
USP47Q96K76 TUBB1P1-201ENST00000503144 1300 ntBASIC20.99■□□□□ 0.95
USP47Q96K76 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC20.99■□□□□ 0.95
USP47Q96K76 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP47Q96K76 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP47Q96K76 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
USP47Q96K76 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
USP47Q96K76 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.98■□□□□ 0.95
USP47Q96K76 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms