Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.63□□□□□ -0.07
VPS33AQ96AX1 AC009093.7-201ENST00000623853 1223 ntBASIC14.63□□□□□ -0.07
VPS33AQ96AX1 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 AL645728.2-202ENST00000641679 227 ntBASIC14.63□□□□□ -0.07
VPS33AQ96AX1 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 CETN4P-206ENST00000642099 2168 ntBASIC14.63□□□□□ -0.07
VPS33AQ96AX1 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.62□□□□□ -0.07
VPS33AQ96AX1 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.62□□□□□ -0.07
VPS33AQ96AX1 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 LILRP1-201ENST00000444199 1370 ntBASIC14.61□□□□□ -0.07
VPS33AQ96AX1 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS33AQ96AX1 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms