Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.69□□□□□ -0.22
FNDC9Q8TBE3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 ANKRD19P-201ENST00000338192 862 ntBASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 AC114812.1-204ENST00000449669 728 ntBASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 KLF2P4-201ENST00000451959 1225 ntBASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 AC148477.4-201ENST00000613430 1793 ntBASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FNDC9Q8TBE3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 AC138969.2-201ENST00000532739 9932 ntBASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 AL645937.2-201ENST00000396808 931 ntBASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 C2orf27AP3-201ENST00000434123 579 ntBASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 AC016694.1-201ENST00000434179 700 ntBASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 AC119751.2-201ENST00000504529 210 ntBASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 GNRHR2-203ENST00000581100 1187 ntBASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 AC244669.2-201ENST00000612320 853 ntBASIC13.67□□□□□ -0.22
FNDC9Q8TBE3 AC133552.6-201ENST00000613406 534 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms