Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.13■□□□□ 0.17
LMO3Q8TAP4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 COX5BP8-201ENST00000416911 349 ntBASIC16.12■□□□□ 0.17
LMO3Q8TAP4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 AC011495.1-201ENST00000498085 584 ntBASIC16.12■□□□□ 0.17
LMO3Q8TAP4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 AC132938.4-201ENST00000623835 848 ntBASIC16.12■□□□□ 0.17
LMO3Q8TAP4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 AC011840.2-201ENST00000563063 1520 ntBASIC16.12■□□□□ 0.17
LMO3Q8TAP4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LMO3Q8TAP4 AC020910.5-201ENST00000623668 1865 ntBASIC16.12■□□□□ 0.17
LMO3Q8TAP4 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 INTS4P1-203ENST00000641008 3683 ntBASIC16.11■□□□□ 0.17
LMO3Q8TAP4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 AL512384.1-201ENST00000406683 331 ntBASIC16.11■□□□□ 0.17
LMO3Q8TAP4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 AL391280.1-201ENST00000506969 1062 ntBASIC16.11■□□□□ 0.17
LMO3Q8TAP4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LMO3Q8TAP4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LMO3Q8TAP4 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LMO3Q8TAP4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LMO3Q8TAP4 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LMO3Q8TAP4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LMO3Q8TAP4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LMO3Q8TAP4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LMO3Q8TAP4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
LMO3Q8TAP4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LMO3Q8TAP4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms