Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 AL603764.1-201ENST00000636452 321 ntBASIC15.42■□□□□ 0.06
CHPFQ8IZ52 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 MIR600HG-201ENST00000449175 5984 ntBASIC15.42■□□□□ 0.06
CHPFQ8IZ52 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHPFQ8IZ52 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 PPT1-215ENST00000641471 2368 ntBASIC15.41■□□□□ 0.06
CHPFQ8IZ52 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.41■□□□□ 0.06
CHPFQ8IZ52 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 POM121L8P-201ENST00000417732 1281 ntBASIC15.41■□□□□ 0.06
CHPFQ8IZ52 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 CALR4P-201ENST00000431943 946 ntBASIC15.41■□□□□ 0.06
CHPFQ8IZ52 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 POM121L9P-203ENST00000441984 1285 ntBASIC15.41■□□□□ 0.06
CHPFQ8IZ52 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 RN7SL713P-201ENST00000582127 302 ntBASIC15.41■□□□□ 0.06
CHPFQ8IZ52 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.41■□□□□ 0.06
CHPFQ8IZ52 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHPFQ8IZ52 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 REXO1L5P-201ENST00000622260 2098 ntBASIC15.4■□□□□ 0.06
CHPFQ8IZ52 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 KRT8P4-201ENST00000509735 1454 ntBASIC15.4■□□□□ 0.06
CHPFQ8IZ52 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 TNRC18P2-201ENST00000417666 2714 ntBASIC15.4■□□□□ 0.06
CHPFQ8IZ52 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 AC068418.2-201ENST00000577309 3703 ntBASIC15.4■□□□□ 0.06
CHPFQ8IZ52 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 MIR663B-201ENST00000408361 115 ntBASIC15.4■□□□□ 0.06
CHPFQ8IZ52 POM121L10P-201ENST00000436994 1285 ntBASIC15.4■□□□□ 0.06
CHPFQ8IZ52 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 HSPB1P2-201ENST00000448722 546 ntBASIC15.4■□□□□ 0.06
CHPFQ8IZ52 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 AC020914.3-201ENST00000594712 304 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms