Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 AC007787.1-201ENST00000588095 1583 ntBASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.82■□□□□ 0.12
TTC39BQ5VTQ0 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 SNX18-202ENST00000343017 3140 ntBASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 AC114812.1-204ENST00000449669 728 ntBASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 AC134312.5-201ENST00000568031 1313 ntBASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TTC39BQ5VTQ0 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 AP001889.1-201ENST00000525414 633 ntBASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 KRT17P8-201ENST00000540749 863 ntBASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 RAB43P1-201ENST00000561790 589 ntBASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 AJ011931.1-201ENST00000618749 2492 ntBASIC15.8■□□□□ 0.12
TTC39BQ5VTQ0 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms