Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 AC006504.5-208ENST00000588784 2401 ntBASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDC42BPAQ5VT25 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.15
CDC42BPAQ5VT25 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.15
CDC42BPAQ5VT25 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 GUSBP10-201ENST00000417412 665 ntBASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 AP000911.2-201ENST00000534330 502 ntBASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 LCK-206ENST00000373564 2137 ntTSL 5 BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 HLA-DMA-203ENST00000395305 777 ntBASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 AL139008.1-201ENST00000437894 228 ntBASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 AC090386.2-201ENST00000623010 1039 ntBASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CDC42BPAQ5VT25 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 KRT17P5-201ENST00000332088 839 ntBASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 RN7SKP109-201ENST00000410592 316 ntBASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 DUX4L50-201ENST00000455245 715 ntBASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 LINC00634-202ENST00000505157 222 ntBASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDC42BPAQ5VT25 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 RN7SL818P-201ENST00000485099 259 ntBASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 RN7SL725P-201ENST00000606439 259 ntBASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 AC138466.5-201ENST00000624002 808 ntBASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 AP001184.1-201ENST00000637936 376 ntBASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms