Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRRK2Q5S007 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LRRK2Q5S007 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRK2Q5S007 OR6D1P-203ENST00000641209 4860 ntBASIC12.86□□□□□ -0.35
LRRK2Q5S007 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.86□□□□□ -0.35
LRRK2Q5S007 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
LRRK2Q5S007 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
LRRK2Q5S007 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC12.86□□□□□ -0.35
LRRK2Q5S007 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRK2Q5S007 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.86□□□□□ -0.35
LRRK2Q5S007 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRK2Q5S007 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRK2Q5S007 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.86□□□□□ -0.35
LRRK2Q5S007 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LRRK2Q5S007 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRK2Q5S007 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRK2Q5S007 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRK2Q5S007 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRRK2Q5S007 AC106827.1-201ENST00000366454 431 ntBASIC12.86□□□□□ -0.35
LRRK2Q5S007 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC12.86□□□□□ -0.35
LRRK2Q5S007 OR5BD1P-201ENST00000532527 817 ntBASIC12.86□□□□□ -0.35
LRRK2Q5S007 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC12.86□□□□□ -0.35
LRRK2Q5S007 EEF1DP7-201ENST00000580496 513 ntBASIC12.86□□□□□ -0.35
LRRK2Q5S007 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRK2Q5S007 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
LRRK2Q5S007 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.86□□□□□ -0.35
LRRK2Q5S007 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.86□□□□□ -0.35
LRRK2Q5S007 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRK2Q5S007 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRK2Q5S007 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRK2Q5S007 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 NQO2-204ENST00000380454 851 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 HNRNPA1P25-201ENST00000422644 937 ntBASIC12.85□□□□□ -0.35
LRRK2Q5S007 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 RN7SL23P-201ENST00000484055 275 ntBASIC12.85□□□□□ -0.35
LRRK2Q5S007 PPIA-208ENST00000489459 907 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 AC090136.2-201ENST00000517809 420 ntBASIC12.85□□□□□ -0.35
LRRK2Q5S007 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 MT2A-202ENST00000561491 581 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 AC010976.2-201ENST00000609697 852 ntBASIC12.85□□□□□ -0.35
LRRK2Q5S007 AL022334.2-201ENST00000610000 484 ntBASIC12.85□□□□□ -0.35
LRRK2Q5S007 PPIA-210ENST00000620047 827 ntTSL 5 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 AC021305.1-201ENST00000520656 1514 ntBASIC12.85□□□□□ -0.35
LRRK2Q5S007 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 AC020931.1-201ENST00000589622 1346 ntBASIC12.85□□□□□ -0.35
LRRK2Q5S007 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 AC124068.2-201ENST00000569473 1109 ntBASIC12.85□□□□□ -0.35
LRRK2Q5S007 AC007952.4-201ENST00000573866 637 ntBASIC12.85□□□□□ -0.35
LRRK2Q5S007 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC12.85□□□□□ -0.35
LRRK2Q5S007 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRK2Q5S007 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LRRK2Q5S007 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms