Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 AC090857.1-201ENST00000527400 390 ntBASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 AC136759.1-202ENST00000530858 2194 ntBASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM71Q2Q1W2 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 AP000845.1-201ENST00000581677 2131 ntBASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 RPL17P11-201ENST00000417593 544 ntBASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 TLE1P1-201ENST00000422965 589 ntBASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 AC078875.1-201ENST00000431907 724 ntBASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 AC008267.1-201ENST00000474858 1069 ntBASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 AC019193.1-201ENST00000506678 823 ntBASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 RN7SL555P-201ENST00000584742 339 ntBASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 BX088702.1-201ENST00000610784 235 ntBASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 MIR6720-201ENST00000611664 98 ntBASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 AC103702.1-201ENST00000548801 2630 ntBASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM71Q2Q1W2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.33■□□□□ 0.21
TRIM71Q2Q1W2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM71Q2Q1W2 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM71Q2Q1W2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
TRIM71Q2Q1W2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM71Q2Q1W2 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM71Q2Q1W2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM71Q2Q1W2 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM71Q2Q1W2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM71Q2Q1W2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TRIM71Q2Q1W2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.33■□□□□ 0.2
TRIM71Q2Q1W2 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms