Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 AC136759.1-202ENST00000530858 2194 ntBASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.53□□□□□ -0.08
RSPO4Q2I0M5 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.52□□□□□ -0.08
RSPO4Q2I0M5 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO4Q2I0M5 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO4Q2I0M5 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO4Q2I0M5 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO4Q2I0M5 AC244394.1-201ENST00000435000 1665 ntBASIC14.52□□□□□ -0.08
RSPO4Q2I0M5 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO4Q2I0M5 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO4Q2I0M5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO4Q2I0M5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
RSPO4Q2I0M5 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RSPO4Q2I0M5 ZNF436-AS1-201ENST00000335648 2547 ntBASIC14.52□□□□□ -0.08
RSPO4Q2I0M5 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RSPO4Q2I0M5 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
RSPO4Q2I0M5 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.52□□□□□ -0.08
RSPO4Q2I0M5 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO4Q2I0M5 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO4Q2I0M5 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.52□□□□□ -0.08
RSPO4Q2I0M5 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RSPO4Q2I0M5 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 RN7SKP175-201ENST00000408472 289 ntBASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 DUTP3-201ENST00000450025 415 ntBASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 MRPL22P1-201ENST00000505398 616 ntBASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 AC009884.2-201ENST00000603110 324 ntBASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 AC006548.2-201ENST00000605217 529 ntBASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.52□□□□□ -0.09
RSPO4Q2I0M5 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 AP000911.2-201ENST00000534330 502 ntBASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 AC027237.1-201ENST00000560942 655 ntBASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 THY1-209ENST00000580275 578 ntTSL 3 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RSPO4Q2I0M5 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms