Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
HSPG2P98160 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
HSPG2P98160 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
HSPG2P98160 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC9.02□□□□□ -0.97
HSPG2P98160 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC9.02□□□□□ -0.97
HSPG2P98160 MIR1226-201ENST00000408658 75 ntBASIC9.02□□□□□ -0.97
HSPG2P98160 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC9.02□□□□□ -0.97
HSPG2P98160 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC9.02□□□□□ -0.97
HSPG2P98160 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
HSPG2P98160 CES1P2-201ENST00000566467 1242 ntBASIC9.02□□□□□ -0.97
HSPG2P98160 AC091304.3-201ENST00000566500 716 ntBASIC9.02□□□□□ -0.97
HSPG2P98160 IFNL3P1-201ENST00000595082 501 ntBASIC9.02□□□□□ -0.97
HSPG2P98160 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
HSPG2P98160 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
HSPG2P98160 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
HSPG2P98160 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
HSPG2P98160 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
HSPG2P98160 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
HSPG2P98160 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
HSPG2P98160 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
HSPG2P98160 LINC02447-202ENST00000501888 2146 ntBASIC9.02□□□□□ -0.97
HSPG2P98160 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC9.02□□□□□ -0.97
HSPG2P98160 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC9.02□□□□□ -0.97
HSPG2P98160 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
HSPG2P98160 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
HSPG2P98160 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
HSPG2P98160 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
HSPG2P98160 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
HSPG2P98160 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC9.02□□□□□ -0.97
HSPG2P98160 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC9.02□□□□□ -0.97
HSPG2P98160 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
HSPG2P98160 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
HSPG2P98160 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC9.02□□□□□ -0.97
HSPG2P98160 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC9.02□□□□□ -0.97
HSPG2P98160 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC9.02□□□□□ -0.97
HSPG2P98160 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
HSPG2P98160 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
HSPG2P98160 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
HSPG2P98160 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC9.02□□□□□ -0.97
HSPG2P98160 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC9.01□□□□□ -0.97
HSPG2P98160 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC9.01□□□□□ -0.97
HSPG2P98160 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
HSPG2P98160 POLR2LP1-206ENST00000444785 187 ntBASIC9.01□□□□□ -0.97
HSPG2P98160 B9D1-206ENST00000461069 923 ntTSL 2 BASIC9.01□□□□□ -0.97
HSPG2P98160 RN7SL375P-201ENST00000492442 298 ntBASIC9.01□□□□□ -0.97
HSPG2P98160 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC9.01□□□□□ -0.97
HSPG2P98160 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC9.01□□□□□ -0.97
HSPG2P98160 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC9.01□□□□□ -0.97
HSPG2P98160 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 MIEF1-215ENST00000637854 213 ntBASIC9.01□□□□□ -0.97
HSPG2P98160 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC9.01□□□□□ -0.97
HSPG2P98160 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC9.01□□□□□ -0.97
HSPG2P98160 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC9.01□□□□□ -0.97
HSPG2P98160 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC9.01□□□□□ -0.97
HSPG2P98160 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 KRT8P28-201ENST00000433288 1390 ntBASIC9.01□□□□□ -0.97
HSPG2P98160 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC9.01□□□□□ -0.97
HSPG2P98160 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC9.01□□□□□ -0.97
HSPG2P98160 ERP29P1-201ENST00000442902 706 ntBASIC9.01□□□□□ -0.97
HSPG2P98160 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 TREX1-203ENST00000456089 629 ntTSL 3 BASIC9.01□□□□□ -0.97
HSPG2P98160 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC9.01□□□□□ -0.97
HSPG2P98160 TMA16-204ENST00000508268 608 ntTSL 2 BASIC9.01□□□□□ -0.97
HSPG2P98160 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC9.01□□□□□ -0.97
HSPG2P98160 AC004923.3-201ENST00000527532 355 ntBASIC9.01□□□□□ -0.97
HSPG2P98160 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC9.01□□□□□ -0.97
HSPG2P98160 CSTP2-201ENST00000610599 398 ntBASIC9.01□□□□□ -0.97
HSPG2P98160 AC091769.1-201ENST00000619576 568 ntBASIC9.01□□□□□ -0.97
HSPG2P98160 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC9.01□□□□□ -0.97
HSPG2P98160 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
HSPG2P98160 RPL4P6-201ENST00000438116 1304 ntBASIC9.01□□□□□ -0.97
HSPG2P98160 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC9.01□□□□□ -0.97
HSPG2P98160 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
HSPG2P98160 BRD7P5-201ENST00000299197 1822 ntBASIC9.01□□□□□ -0.97
HSPG2P98160 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC9.01□□□□□ -0.97
HSPG2P98160 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC9.01□□□□□ -0.97
HSPG2P98160 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
HSPG2P98160 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 GCOM2-201ENST00000509133 1104 ntBASIC9.01□□□□□ -0.97
HSPG2P98160 AC095040.1-201ENST00000513286 675 ntBASIC9.01□□□□□ -0.97
HSPG2P98160 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC9.01□□□□□ -0.97
HSPG2P98160 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC9.01□□□□□ -0.97
HSPG2P98160 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms