Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.38□□□□□ -0.27
SEC61A1P61619 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
SEC61A1P61619 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
SEC61A1P61619 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SEC61A1P61619 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.37□□□□□ -0.27
SEC61A1P61619 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.37□□□□□ -0.27
SEC61A1P61619 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.37□□□□□ -0.27
SEC61A1P61619 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
SEC61A1P61619 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SEC61A1P61619 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SEC61A1P61619 KRT8P12-202ENST00000472924 1397 ntBASIC13.37□□□□□ -0.27
SEC61A1P61619 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SEC61A1P61619 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.37□□□□□ -0.27
SEC61A1P61619 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.37□□□□□ -0.27
SEC61A1P61619 FAM207CP-201ENST00000443486 507 ntBASIC13.37□□□□□ -0.27
SEC61A1P61619 COX20P2-201ENST00000452636 358 ntBASIC13.37□□□□□ -0.27
SEC61A1P61619 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SEC61A1P61619 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.37□□□□□ -0.27
SEC61A1P61619 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.37□□□□□ -0.27
SEC61A1P61619 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.37□□□□□ -0.27
SEC61A1P61619 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.37□□□□□ -0.27
SEC61A1P61619 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.37□□□□□ -0.27
SEC61A1P61619 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.37□□□□□ -0.27
SEC61A1P61619 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
SEC61A1P61619 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.37□□□□□ -0.27
SEC61A1P61619 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.37□□□□□ -0.27
SEC61A1P61619 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
SEC61A1P61619 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 HSPA7-201ENST00000445535 1927 ntBASIC13.37□□□□□ -0.27
SEC61A1P61619 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SEC61A1P61619 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEC61A1P61619 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
SEC61A1P61619 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.36□□□□□ -0.27
SEC61A1P61619 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SEC61A1P61619 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.36□□□□□ -0.27
SEC61A1P61619 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SEC61A1P61619 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.36□□□□□ -0.27
SEC61A1P61619 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SEC61A1P61619 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.36□□□□□ -0.27
SEC61A1P61619 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.36□□□□□ -0.27
SEC61A1P61619 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SEC61A1P61619 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SEC61A1P61619 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SEC61A1P61619 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
SEC61A1P61619 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.36□□□□□ -0.27
SEC61A1P61619 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.36□□□□□ -0.27
SEC61A1P61619 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.36□□□□□ -0.27
SEC61A1P61619 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.36□□□□□ -0.27
SEC61A1P61619 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 AC044860.1-202ENST00000559481 777 ntBASIC13.36□□□□□ -0.27
SEC61A1P61619 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.36□□□□□ -0.27
SEC61A1P61619 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 BX640514.1-201ENST00000583223 1918 ntBASIC13.36□□□□□ -0.27
SEC61A1P61619 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.36□□□□□ -0.27
SEC61A1P61619 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SEC61A1P61619 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SEC61A1P61619 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms