Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.25□□□□□ -0.29
FOXG1P55316 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FOXG1P55316 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.25□□□□□ -0.29
FOXG1P55316 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.25□□□□□ -0.29
FOXG1P55316 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.25□□□□□ -0.29
FOXG1P55316 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.25□□□□□ -0.29
FOXG1P55316 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.25□□□□□ -0.29
FOXG1P55316 AC007274.1-201ENST00000439805 662 ntBASIC13.25□□□□□ -0.29
FOXG1P55316 AC244107.1-201ENST00000442033 332 ntBASIC13.25□□□□□ -0.29
FOXG1P55316 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
FOXG1P55316 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
FOXG1P55316 AL391280.1-201ENST00000506969 1062 ntBASIC13.25□□□□□ -0.29
FOXG1P55316 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.25□□□□□ -0.29
FOXG1P55316 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.25□□□□□ -0.29
FOXG1P55316 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
FOXG1P55316 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
FOXG1P55316 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.25□□□□□ -0.29
FOXG1P55316 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.25□□□□□ -0.29
FOXG1P55316 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.25□□□□□ -0.29
FOXG1P55316 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.25□□□□□ -0.29
FOXG1P55316 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.25□□□□□ -0.29
FOXG1P55316 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
FOXG1P55316 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
FOXG1P55316 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.25□□□□□ -0.29
FOXG1P55316 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FOXG1P55316 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.25□□□□□ -0.29
FOXG1P55316 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FOXG1P55316 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FOXG1P55316 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.25□□□□□ -0.29
FOXG1P55316 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FOXG1P55316 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FOXG1P55316 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
FOXG1P55316 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FOXG1P55316 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FOXG1P55316 AC020910.5-201ENST00000623668 1865 ntBASIC13.25□□□□□ -0.29
FOXG1P55316 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FOXG1P55316 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.25□□□□□ -0.29
FOXG1P55316 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.25□□□□□ -0.29
FOXG1P55316 NORAD-201ENST00000565493 5339 ntBASIC13.25□□□□□ -0.29
FOXG1P55316 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
FOXG1P55316 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
FOXG1P55316 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
FOXG1P55316 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FOXG1P55316 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
FOXG1P55316 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FOXG1P55316 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FOXG1P55316 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FOXG1P55316 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
FOXG1P55316 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FOXG1P55316 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FOXG1P55316 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
FOXG1P55316 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
FOXG1P55316 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.24□□□□□ -0.29
FOXG1P55316 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
FOXG1P55316 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
FOXG1P55316 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
FOXG1P55316 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.24□□□□□ -0.29
FOXG1P55316 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
FOXG1P55316 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.24□□□□□ -0.29
FOXG1P55316 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FOXG1P55316 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FOXG1P55316 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.24□□□□□ -0.29
FOXG1P55316 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.24□□□□□ -0.29
FOXG1P55316 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.24□□□□□ -0.29
FOXG1P55316 RPS2P32-201ENST00000439199 892 ntBASIC13.24□□□□□ -0.29
FOXG1P55316 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.24□□□□□ -0.29
FOXG1P55316 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.24□□□□□ -0.29
FOXG1P55316 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.24□□□□□ -0.29
FOXG1P55316 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.24□□□□□ -0.29
FOXG1P55316 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.24□□□□□ -0.29
FOXG1P55316 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
FOXG1P55316 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.24□□□□□ -0.29
FOXG1P55316 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.24□□□□□ -0.29
FOXG1P55316 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.24□□□□□ -0.29
FOXG1P55316 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.24□□□□□ -0.29
FOXG1P55316 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FOXG1P55316 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FOXG1P55316 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FOXG1P55316 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FOXG1P55316 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.24□□□□□ -0.29
FOXG1P55316 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FOXG1P55316 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
FOXG1P55316 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FOXG1P55316 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
FOXG1P55316 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FOXG1P55316 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
FOXG1P55316 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FOXG1P55316 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
FOXG1P55316 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.24□□□□□ -0.29
FOXG1P55316 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.24□□□□□ -0.29
FOXG1P55316 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FOXG1P55316 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
FOXG1P55316 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.24□□□□□ -0.29
FOXG1P55316 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.24□□□□□ -0.29
FOXG1P55316 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 AL354989.2-201ENST00000435838 1540 ntBASIC13.23□□□□□ -0.29
FOXG1P55316 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.23□□□□□ -0.29
FOXG1P55316 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
FOXG1P55316 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms