Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF144AP50876 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.17□□□□□ -0.14
RNF144AP50876 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF144AP50876 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.17□□□□□ -0.14
RNF144AP50876 SPCS2P1-201ENST00000561636 679 ntBASIC14.17□□□□□ -0.14
RNF144AP50876 RN7SL204P-201ENST00000582831 262 ntBASIC14.17□□□□□ -0.14
RNF144AP50876 AC011467.4-201ENST00000594891 528 ntBASIC14.17□□□□□ -0.14
RNF144AP50876 LINC02560-201ENST00000596379 459 ntBASIC14.17□□□□□ -0.14
RNF144AP50876 CHCHD2P3-201ENST00000603038 451 ntBASIC14.17□□□□□ -0.14
RNF144AP50876 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF144AP50876 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RNF144AP50876 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF144AP50876 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
RNF144AP50876 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF144AP50876 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF144AP50876 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RNF144AP50876 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF144AP50876 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.16□□□□□ -0.14
RNF144AP50876 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.16□□□□□ -0.14
RNF144AP50876 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF144AP50876 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.16□□□□□ -0.14
RNF144AP50876 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF144AP50876 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF144AP50876 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF144AP50876 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RNF144AP50876 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RNF144AP50876 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF144AP50876 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF144AP50876 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
RNF144AP50876 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF144AP50876 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF144AP50876 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF144AP50876 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF144AP50876 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF144AP50876 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
RNF144AP50876 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.16□□□□□ -0.14
RNF144AP50876 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF144AP50876 ARL4AP4-201ENST00000434170 518 ntBASIC14.16□□□□□ -0.14
RNF144AP50876 AC002472.2-201ENST00000442739 958 ntBASIC14.16□□□□□ -0.14
RNF144AP50876 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.16□□□□□ -0.14
RNF144AP50876 RARRES2P5-201ENST00000564013 466 ntBASIC14.16□□□□□ -0.14
RNF144AP50876 MIR3908-201ENST00000579798 126 ntBASIC14.16□□□□□ -0.14
RNF144AP50876 AC000095.1-201ENST00000603208 874 ntBASIC14.16□□□□□ -0.14
RNF144AP50876 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF144AP50876 AC107373.2-201ENST00000607735 490 ntBASIC14.16□□□□□ -0.14
RNF144AP50876 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.16□□□□□ -0.14
RNF144AP50876 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF144AP50876 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RNF144AP50876 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF144AP50876 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF144AP50876 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF144AP50876 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF144AP50876 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RNF144AP50876 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.16□□□□□ -0.14
RNF144AP50876 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF144AP50876 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF144AP50876 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF144AP50876 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RNF144AP50876 LINC00552-201ENST00000625151 2579 ntBASIC14.15□□□□□ -0.14
RNF144AP50876 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 FGD5P1-202ENST00000614866 2498 ntBASIC14.15□□□□□ -0.14
RNF144AP50876 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RNF144AP50876 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.15□□□□□ -0.14
RNF144AP50876 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF144AP50876 HMGN1P19-201ENST00000436976 333 ntBASIC14.15□□□□□ -0.14
RNF144AP50876 RN7SL399P-201ENST00000471648 279 ntBASIC14.15□□□□□ -0.14
RNF144AP50876 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF144AP50876 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.15□□□□□ -0.14
RNF144AP50876 WASH4P-201ENST00000564273 1246 ntBASIC14.15□□□□□ -0.14
RNF144AP50876 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms