Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.28■□□□□ 0.04
CHRNA4P43681 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRNA4P43681 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CHRNA4P43681 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA4P43681 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRNA4P43681 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRNA4P43681 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CHRNA4P43681 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA4P43681 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRNA4P43681 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRNA4P43681 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRNA4P43681 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA4P43681 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA4P43681 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA4P43681 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRNA4P43681 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA4P43681 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CHRNA4P43681 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA4P43681 AC114812.1-204ENST00000449669 728 ntBASIC15.28■□□□□ 0.04
CHRNA4P43681 RN7SL837P-201ENST00000463010 287 ntBASIC15.28■□□□□ 0.04
CHRNA4P43681 AC026434.2-201ENST00000506094 1078 ntBASIC15.28■□□□□ 0.04
CHRNA4P43681 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRNA4P43681 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CHRNA4P43681 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.28■□□□□ 0.04
CHRNA4P43681 DUX4L47-201ENST00000566374 394 ntBASIC15.28■□□□□ 0.04
CHRNA4P43681 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.28■□□□□ 0.04
CHRNA4P43681 AC010319.3-201ENST00000597028 470 ntBASIC15.28■□□□□ 0.04
CHRNA4P43681 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.28■□□□□ 0.04
CHRNA4P43681 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.28■□□□□ 0.04
CHRNA4P43681 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA4P43681 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA4P43681 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA4P43681 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA4P43681 AC023908.3-201ENST00000564211 3047 ntBASIC15.28■□□□□ 0.04
CHRNA4P43681 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CHRNA4P43681 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CHRNA4P43681 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA4P43681 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA4P43681 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA4P43681 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA4P43681 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRNA4P43681 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA4P43681 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CHRNA4P43681 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CHRNA4P43681 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CHRNA4P43681 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHRNA4P43681 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHRNA4P43681 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHRNA4P43681 AL513477.1-201ENST00000602865 2407 ntBASIC15.27■□□□□ 0.04
CHRNA4P43681 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CHRNA4P43681 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHRNA4P43681 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CHRNA4P43681 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHRNA4P43681 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.27■□□□□ 0.04
CHRNA4P43681 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CHRNA4P43681 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.27■□□□□ 0.04
CHRNA4P43681 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.27■□□□□ 0.04
CHRNA4P43681 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CHRNA4P43681 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CHRNA4P43681 AC022137.2-201ENST00000503482 481 ntBASIC15.27■□□□□ 0.04
CHRNA4P43681 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.27■□□□□ 0.04
CHRNA4P43681 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.27■□□□□ 0.04
CHRNA4P43681 MIR5189-201ENST00000577370 114 ntBASIC15.27■□□□□ 0.04
CHRNA4P43681 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.27■□□□□ 0.04
CHRNA4P43681 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.27■□□□□ 0.04
CHRNA4P43681 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.27■□□□□ 0.04
CHRNA4P43681 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.27■□□□□ 0.04
CHRNA4P43681 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHRNA4P43681 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.27■□□□□ 0.04
CHRNA4P43681 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHRNA4P43681 AC232323.1-201ENST00000540724 2099 ntBASIC15.27■□□□□ 0.03
CHRNA4P43681 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.27■□□□□ 0.03
CHRNA4P43681 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CHRNA4P43681 AC099063.4-201ENST00000641099 1602 ntBASIC15.27■□□□□ 0.03
CHRNA4P43681 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHRNA4P43681 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
CHRNA4P43681 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CHRNA4P43681 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHRNA4P43681 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.27■□□□□ 0.03
CHRNA4P43681 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CHRNA4P43681 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CHRNA4P43681 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CHRNA4P43681 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHRNA4P43681 AC140479.7-201ENST00000636301 2332 ntBASIC15.27■□□□□ 0.03
CHRNA4P43681 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.27■□□□□ 0.03
CHRNA4P43681 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
CHRNA4P43681 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
CHRNA4P43681 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
CHRNA4P43681 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.26■□□□□ 0.03
CHRNA4P43681 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
CHRNA4P43681 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA4P43681 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CHRNA4P43681 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA4P43681 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CHRNA4P43681 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.26■□□□□ 0.03
CHRNA4P43681 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA4P43681 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA4P43681 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA4P43681 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA4P43681 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms