Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 INTS4P2-202ENST00000614726 2019 ntBASIC13.95□□□□□ -0.18
SHC1P29353 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.94□□□□□ -0.18
SHC1P29353 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
SHC1P29353 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.94□□□□□ -0.18
SHC1P29353 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.94□□□□□ -0.18
SHC1P29353 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.94□□□□□ -0.18
SHC1P29353 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.94□□□□□ -0.18
SHC1P29353 SBF1P1-201ENST00000444527 5631 ntBASIC13.94□□□□□ -0.18
SHC1P29353 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 RN7SL692P-201ENST00000464677 288 ntBASIC13.94□□□□□ -0.18
SHC1P29353 GAPDHP40-201ENST00000505218 1006 ntBASIC13.94□□□□□ -0.18
SHC1P29353 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.94□□□□□ -0.18
SHC1P29353 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SHC1P29353 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.94□□□□□ -0.18
SHC1P29353 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.94□□□□□ -0.18
SHC1P29353 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SHC1P29353 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SHC1P29353 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.94□□□□□ -0.18
SHC1P29353 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.94□□□□□ -0.18
SHC1P29353 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.94□□□□□ -0.18
SHC1P29353 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.94□□□□□ -0.18
SHC1P29353 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.94□□□□□ -0.18
SHC1P29353 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
SHC1P29353 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.94□□□□□ -0.18
SHC1P29353 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SHC1P29353 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.94□□□□□ -0.18
SHC1P29353 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.94□□□□□ -0.18
SHC1P29353 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHC1P29353 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
SHC1P29353 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SHC1P29353 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.94□□□□□ -0.18
SHC1P29353 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.93□□□□□ -0.18
SHC1P29353 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.93□□□□□ -0.18
SHC1P29353 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SHC1P29353 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.93□□□□□ -0.18
SHC1P29353 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.93□□□□□ -0.18
SHC1P29353 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SHC1P29353 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.93□□□□□ -0.18
SHC1P29353 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.93□□□□□ -0.18
SHC1P29353 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.93□□□□□ -0.18
SHC1P29353 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SHC1P29353 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.93□□□□□ -0.18
SHC1P29353 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SHC1P29353 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.93□□□□□ -0.18
SHC1P29353 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.93□□□□□ -0.18
SHC1P29353 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.93□□□□□ -0.18
SHC1P29353 AC026410.3-201ENST00000514280 936 ntBASIC13.93□□□□□ -0.18
SHC1P29353 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.93□□□□□ -0.18
SHC1P29353 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.93□□□□□ -0.18
SHC1P29353 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.93□□□□□ -0.18
SHC1P29353 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.93□□□□□ -0.18
SHC1P29353 AL596325.1-201ENST00000563991 1082 ntBASIC13.93□□□□□ -0.18
SHC1P29353 AC120045.2-201ENST00000567334 178 ntBASIC13.93□□□□□ -0.18
SHC1P29353 AC124283.3-201ENST00000570869 594 ntBASIC13.93□□□□□ -0.18
SHC1P29353 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.93□□□□□ -0.18
SHC1P29353 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms