Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDE6GP18545 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PDE6GP18545 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
PDE6GP18545 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDE6GP18545 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
PDE6GP18545 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDE6GP18545 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDE6GP18545 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDE6GP18545 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDE6GP18545 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDE6GP18545 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDE6GP18545 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
PDE6GP18545 AC024075.2-201ENST00000598112 1473 ntBASIC9.39□□□□□ -0.91
PDE6GP18545 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDE6GP18545 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PDE6GP18545 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDE6GP18545 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PDE6GP18545 ALK-205ENST00000618119 4646 ntTSL 5 BASIC9.39□□□□□ -0.91
PDE6GP18545 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDE6GP18545 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
PDE6GP18545 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDE6GP18545 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDE6GP18545 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC9.39□□□□□ -0.91
PDE6GP18545 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDE6GP18545 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PDE6GP18545 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PDE6GP18545 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDE6GP18545 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PDE6GP18545 AC023794.5-201ENST00000564380 2157 ntBASIC9.39□□□□□ -0.91
PDE6GP18545 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC9.39□□□□□ -0.91
PDE6GP18545 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC9.39□□□□□ -0.91
PDE6GP18545 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC9.38□□□□□ -0.91
PDE6GP18545 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
PDE6GP18545 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
PDE6GP18545 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC9.38□□□□□ -0.91
PDE6GP18545 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC9.38□□□□□ -0.91
PDE6GP18545 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
PDE6GP18545 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 AC068760.1-201ENST00000493579 1953 ntBASIC9.38□□□□□ -0.91
PDE6GP18545 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC9.38□□□□□ -0.91
PDE6GP18545 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 RCN1P2-201ENST00000398357 915 ntBASIC9.38□□□□□ -0.91
PDE6GP18545 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC9.38□□□□□ -0.91
PDE6GP18545 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC9.38□□□□□ -0.91
PDE6GP18545 AC112907.2-201ENST00000448639 330 ntBASIC9.38□□□□□ -0.91
PDE6GP18545 RBSN-204ENST00000449050 903 ntTSL 2 BASIC9.38□□□□□ -0.91
PDE6GP18545 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC9.38□□□□□ -0.91
PDE6GP18545 KRT8P26-201ENST00000534154 1276 ntBASIC9.38□□□□□ -0.91
PDE6GP18545 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC9.38□□□□□ -0.91
PDE6GP18545 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC9.38□□□□□ -0.91
PDE6GP18545 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC9.38□□□□□ -0.91
PDE6GP18545 AC011558.1-201ENST00000623459 338 ntBASIC9.38□□□□□ -0.91
PDE6GP18545 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
PDE6GP18545 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC9.38□□□□□ -0.91
PDE6GP18545 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC9.38□□□□□ -0.91
PDE6GP18545 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
PDE6GP18545 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
PDE6GP18545 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 OS9-206ENST00000435406 2346 ntTSL 2 BASIC9.38□□□□□ -0.91
PDE6GP18545 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
PDE6GP18545 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC9.38□□□□□ -0.91
PDE6GP18545 FOS-202ENST00000535987 1402 ntTSL 2 BASIC9.38□□□□□ -0.91
PDE6GP18545 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC9.38□□□□□ -0.91
PDE6GP18545 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
PDE6GP18545 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC9.38□□□□□ -0.91
PDE6GP18545 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
PDE6GP18545 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDE6GP18545 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
PDE6GP18545 LINC01568-207ENST00000641790 1380 ntBASIC9.37□□□□□ -0.91
PDE6GP18545 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms