Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RARAP10276 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RARAP10276 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RARAP10276 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RARAP10276 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RARAP10276 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.92■□□□□ 0.14
RARAP10276 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RARAP10276 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
RARAP10276 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RARAP10276 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RARAP10276 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RARAP10276 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RARAP10276 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.92■□□□□ 0.14
RARAP10276 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.92■□□□□ 0.14
RARAP10276 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RARAP10276 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.92■□□□□ 0.14
RARAP10276 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
RARAP10276 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.92■□□□□ 0.14
RARAP10276 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RARAP10276 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RARAP10276 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RARAP10276 TSPY16P-201ENST00000449843 468 ntBASIC15.92■□□□□ 0.14
RARAP10276 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.92■□□□□ 0.14
RARAP10276 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.92■□□□□ 0.14
RARAP10276 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.92■□□□□ 0.14
RARAP10276 AC099568.2-201ENST00000609194 695 ntBASIC15.92■□□□□ 0.14
RARAP10276 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.92■□□□□ 0.14
RARAP10276 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RARAP10276 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RARAP10276 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.92■□□□□ 0.14
RARAP10276 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RARAP10276 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.92■□□□□ 0.14
RARAP10276 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.92■□□□□ 0.14
RARAP10276 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RARAP10276 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.92■□□□□ 0.14
RARAP10276 AL161772.1-201ENST00000610494 4412 ntBASIC15.92■□□□□ 0.14
RARAP10276 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.92■□□□□ 0.14
RARAP10276 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RARAP10276 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RARAP10276 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.92■□□□□ 0.14
RARAP10276 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.92■□□□□ 0.14
RARAP10276 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RARAP10276 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.91■□□□□ 0.14
RARAP10276 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RARAP10276 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
RARAP10276 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RARAP10276 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RARAP10276 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RARAP10276 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.91■□□□□ 0.14
RARAP10276 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RARAP10276 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RARAP10276 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RARAP10276 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.91■□□□□ 0.14
RARAP10276 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RARAP10276 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.91■□□□□ 0.14
RARAP10276 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
RARAP10276 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RARAP10276 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.91■□□□□ 0.14
RARAP10276 MIR661-201ENST00000384842 89 ntBASIC15.91■□□□□ 0.14
RARAP10276 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RARAP10276 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.91■□□□□ 0.14
RARAP10276 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.91■□□□□ 0.14
RARAP10276 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RARAP10276 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RARAP10276 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RARAP10276 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.91■□□□□ 0.14
RARAP10276 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.91■□□□□ 0.14
RARAP10276 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.91■□□□□ 0.14
RARAP10276 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.91■□□□□ 0.14
RARAP10276 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.91■□□□□ 0.14
RARAP10276 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.91■□□□□ 0.14
RARAP10276 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.91■□□□□ 0.14
RARAP10276 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.91■□□□□ 0.14
RARAP10276 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.91■□□□□ 0.14
RARAP10276 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RARAP10276 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.91■□□□□ 0.14
RARAP10276 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RARAP10276 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.91■□□□□ 0.14
RARAP10276 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RARAP10276 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
RARAP10276 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RARAP10276 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RARAP10276 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RARAP10276 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RARAP10276 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RARAP10276 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RARAP10276 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.91■□□□□ 0.14
RARAP10276 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RARAP10276 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
RARAP10276 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.91■□□□□ 0.14
RARAP10276 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.91■□□□□ 0.14
RARAP10276 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RARAP10276 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RARAP10276 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RARAP10276 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
RARAP10276 AL158070.2-201ENST00000623713 1621 ntBASIC15.9■□□□□ 0.14
RARAP10276 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RARAP10276 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.9■□□□□ 0.14
RARAP10276 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RARAP10276 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms