Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
UBCP0CG48 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
UBCP0CG48 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
UBCP0CG48 LILRP1-201ENST00000444199 1370 ntBASIC13.36□□□□□ -0.27
UBCP0CG48 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.36□□□□□ -0.27
UBCP0CG48 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
UBCP0CG48 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
UBCP0CG48 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.36□□□□□ -0.27
UBCP0CG48 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.36□□□□□ -0.27
UBCP0CG48 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.36□□□□□ -0.27
UBCP0CG48 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
UBCP0CG48 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
UBCP0CG48 RPSAP43-201ENST00000402237 625 ntBASIC13.36□□□□□ -0.27
UBCP0CG48 UPF3AP3-201ENST00000420996 769 ntBASIC13.36□□□□□ -0.27
UBCP0CG48 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 AC112482.1-201ENST00000492080 688 ntBASIC13.36□□□□□ -0.27
UBCP0CG48 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.36□□□□□ -0.27
UBCP0CG48 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.36□□□□□ -0.27
UBCP0CG48 AL512361.1-201ENST00000554200 418 ntBASIC13.36□□□□□ -0.27
UBCP0CG48 AC010336.2-201ENST00000564226 506 ntBASIC13.36□□□□□ -0.27
UBCP0CG48 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
UBCP0CG48 AC051619.7-201ENST00000568314 623 ntBASIC13.36□□□□□ -0.27
UBCP0CG48 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.36□□□□□ -0.27
UBCP0CG48 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.36□□□□□ -0.27
UBCP0CG48 TEX28P1-201ENST00000613479 1221 ntBASIC13.36□□□□□ -0.27
UBCP0CG48 TEX28P2-201ENST00000617764 1221 ntBASIC13.36□□□□□ -0.27
UBCP0CG48 SPDYE12P-201ENST00000618416 771 ntBASIC13.36□□□□□ -0.27
UBCP0CG48 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
UBCP0CG48 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.36□□□□□ -0.27
UBCP0CG48 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
UBCP0CG48 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.36□□□□□ -0.27
UBCP0CG48 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.36□□□□□ -0.27
UBCP0CG48 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.36□□□□□ -0.27
UBCP0CG48 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.36□□□□□ -0.27
UBCP0CG48 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
UBCP0CG48 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
UBCP0CG48 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.35□□□□□ -0.27
UBCP0CG48 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.35□□□□□ -0.27
UBCP0CG48 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.35□□□□□ -0.27
UBCP0CG48 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.35□□□□□ -0.27
UBCP0CG48 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
UBCP0CG48 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.35□□□□□ -0.27
UBCP0CG48 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.35□□□□□ -0.27
UBCP0CG48 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.35□□□□□ -0.27
UBCP0CG48 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.35□□□□□ -0.27
UBCP0CG48 CNN2P11-201ENST00000429351 262 ntBASIC13.35□□□□□ -0.27
UBCP0CG48 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 CNN2P2-201ENST00000443536 909 ntBASIC13.35□□□□□ -0.27
UBCP0CG48 CNN2P3-201ENST00000450201 906 ntBASIC13.35□□□□□ -0.27
UBCP0CG48 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.35□□□□□ -0.27
UBCP0CG48 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
UBCP0CG48 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
UBCP0CG48 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
UBCP0CG48 AL136317.3-201ENST00000618497 906 ntBASIC13.35□□□□□ -0.27
UBCP0CG48 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.35□□□□□ -0.27
UBCP0CG48 AC107918.4-201ENST00000641966 3141 ntBASIC13.35□□□□□ -0.27
UBCP0CG48 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
UBCP0CG48 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
UBCP0CG48 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
UBCP0CG48 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.35□□□□□ -0.27
UBCP0CG48 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms