Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 GNRHR2-203ENST00000581100 1187 ntBASIC15.34■□□□□ 0.05
HLA-DQB2P05538 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 AC015936.2-201ENST00000593177 259 ntBASIC15.34■□□□□ 0.05
HLA-DQB2P05538 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 AL138709.1-201ENST00000614840 1693 ntBASIC15.34■□□□□ 0.05
HLA-DQB2P05538 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQB2P05538 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HLA-DQB2P05538 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.33■□□□□ 0.05
HLA-DQB2P05538 LINC00552-201ENST00000625151 2579 ntBASIC15.33■□□□□ 0.05
HLA-DQB2P05538 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HLA-DQB2P05538 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
HLA-DQB2P05538 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HLA-DQB2P05538 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.33■□□□□ 0.05
HLA-DQB2P05538 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HLA-DQB2P05538 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.33■□□□□ 0.05
HLA-DQB2P05538 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 SLC25A47P1-201ENST00000531577 414 ntBASIC15.33■□□□□ 0.04
HLA-DQB2P05538 AC005225.4-201ENST00000557330 545 ntBASIC15.33■□□□□ 0.04
HLA-DQB2P05538 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 AC012645.4-201ENST00000610691 1061 ntBASIC15.33■□□□□ 0.04
HLA-DQB2P05538 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 FLJ16779-201ENST00000612722 7638 ntBASIC15.33■□□□□ 0.04
HLA-DQB2P05538 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 AC018665.1-201ENST00000622927 1362 ntBASIC15.33■□□□□ 0.04
HLA-DQB2P05538 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQB2P05538 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB2P05538 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB2P05538 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB2P05538 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.32■□□□□ 0.04
HLA-DQB2P05538 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.32■□□□□ 0.04
HLA-DQB2P05538 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.32■□□□□ 0.04
HLA-DQB2P05538 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.32■□□□□ 0.04
HLA-DQB2P05538 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB2P05538 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
HLA-DQB2P05538 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQB2P05538 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms