Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPNS1P04632 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.12■□□□□ 0.01
CAPNS1P04632 AC139749.1-202ENST00000617529 3139 ntBASIC15.12■□□□□ 0.01
CAPNS1P04632 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.12■□□□□ 0.01
CAPNS1P04632 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPNS1P04632 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
CAPNS1P04632 MSTO2P-201ENST00000314835 1709 ntBASIC15.12■□□□□ 0.01
CAPNS1P04632 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CAPNS1P04632 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CAPNS1P04632 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 AC140479.7-201ENST00000636301 2332 ntBASIC15.11■□□□□ 0.01
CAPNS1P04632 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CAPNS1P04632 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.11■□□□□ 0.01
CAPNS1P04632 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.11■□□□□ 0.01
CAPNS1P04632 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPNS1P04632 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CAPNS1P04632 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.11■□□□□ 0.01
CAPNS1P04632 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.11■□□□□ 0.01
CAPNS1P04632 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.11■□□□□ 0.01
CAPNS1P04632 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.11■□□□□ 0.01
CAPNS1P04632 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.11■□□□□ 0.01
CAPNS1P04632 HIST2H2BC-201ENST00000498492 580 ntBASIC15.11■□□□□ 0.01
CAPNS1P04632 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.11■□□□□ 0.01
CAPNS1P04632 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.11■□□□□ 0.01
CAPNS1P04632 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CAPNS1P04632 HNRNPUP1-201ENST00000554987 333 ntBASIC15.11■□□□□ 0.01
CAPNS1P04632 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.11■□□□□ 0.01
CAPNS1P04632 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.11■□□□□ 0.01
CAPNS1P04632 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.11■□□□□ 0.01
CAPNS1P04632 GNRHR2-203ENST00000581100 1187 ntBASIC15.11■□□□□ 0.01
CAPNS1P04632 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPNS1P04632 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CAPNS1P04632 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CAPNS1P04632 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPNS1P04632 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
CAPNS1P04632 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPNS1P04632 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CAPNS1P04632 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
CAPNS1P04632 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
CAPNS1P04632 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CAPNS1P04632 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CAPNS1P04632 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.11■□□□□ 0.01
CAPNS1P04632 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPNS1P04632 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPNS1P04632 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.1■□□□□ 0.01
CAPNS1P04632 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPNS1P04632 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPNS1P04632 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPNS1P04632 AC009090.5-201ENST00000624886 2285 ntBASIC15.1■□□□□ 0.01
CAPNS1P04632 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPNS1P04632 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
CAPNS1P04632 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.1■□□□□ 0.01
CAPNS1P04632 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPNS1P04632 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.1■□□□□ 0.01
CAPNS1P04632 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CAPNS1P04632 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CAPNS1P04632 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CAPNS1P04632 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPNS1P04632 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CAPNS1P04632 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPNS1P04632 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.1■□□□□ 0.01
CAPNS1P04632 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPNS1P04632 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPNS1P04632 MIR33B-201ENST00000385104 96 ntBASIC15.1■□□□□ 0.01
CAPNS1P04632 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPNS1P04632 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPNS1P04632 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CAPNS1P04632 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CAPNS1P04632 RPL13P2-201ENST00000440687 659 ntBASIC15.1■□□□□ 0.01
CAPNS1P04632 FAM86LP-201ENST00000478302 853 ntBASIC15.1■□□□□ 0.01
CAPNS1P04632 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CAPNS1P04632 AC106760.1-201ENST00000508690 800 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms