Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 CRB3P1-201ENST00000449338 276 ntBASIC17.62■□□□□ 0.41
CDKL5O76039 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.62■□□□□ 0.41
CDKL5O76039 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.62■□□□□ 0.41
CDKL5O76039 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.62■□□□□ 0.41
CDKL5O76039 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.62■□□□□ 0.41
CDKL5O76039 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.62■□□□□ 0.41
CDKL5O76039 AL033527.5-201ENST00000641382 801 ntBASIC17.62■□□□□ 0.41
CDKL5O76039 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.62■□□□□ 0.41
CDKL5O76039 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.62■□□□□ 0.41
CDKL5O76039 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CDKL5O76039 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CDKL5O76039 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CDKL5O76039 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDKL5O76039 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDKL5O76039 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.62■□□□□ 0.41
CDKL5O76039 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 AC023090.2-201ENST00000625182 2110 ntBASIC17.62■□□□□ 0.41
CDKL5O76039 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL5O76039 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.62■□□□□ 0.41
CDKL5O76039 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CDKL5O76039 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL5O76039 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
CDKL5O76039 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.61■□□□□ 0.41
CDKL5O76039 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.61■□□□□ 0.41
CDKL5O76039 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CDKL5O76039 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL5O76039 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL5O76039 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL5O76039 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL5O76039 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL5O76039 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CDKL5O76039 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CDKL5O76039 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL5O76039 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL5O76039 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CDKL5O76039 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
CDKL5O76039 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CDKL5O76039 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL5O76039 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL5O76039 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL5O76039 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.61■□□□□ 0.41
CDKL5O76039 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CDKL5O76039 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.61■□□□□ 0.41
CDKL5O76039 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.61■□□□□ 0.41
CDKL5O76039 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.61■□□□□ 0.41
CDKL5O76039 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.61■□□□□ 0.41
CDKL5O76039 CLUHP6-201ENST00000580789 941 ntBASIC17.61■□□□□ 0.41
CDKL5O76039 AC092364.2-202ENST00000597012 1073 ntBASIC17.61■□□□□ 0.41
CDKL5O76039 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.61■□□□□ 0.41
CDKL5O76039 AC018529.2-202ENST00000611482 3087 ntBASIC17.61■□□□□ 0.41
CDKL5O76039 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL5O76039 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CDKL5O76039 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
CDKL5O76039 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.61■□□□□ 0.41
CDKL5O76039 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL5O76039 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
CDKL5O76039 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CDKL5O76039 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL5O76039 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL5O76039 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.61■□□□□ 0.41
CDKL5O76039 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL5O76039 AC055811.4-201ENST00000624039 1754 ntBASIC17.61■□□□□ 0.41
CDKL5O76039 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.6■□□□□ 0.41
CDKL5O76039 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.6■□□□□ 0.41
CDKL5O76039 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CDKL5O76039 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.6■□□□□ 0.41
CDKL5O76039 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CDKL5O76039 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CDKL5O76039 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CDKL5O76039 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.6■□□□□ 0.41
CDKL5O76039 HMGN1P19-201ENST00000436976 333 ntBASIC17.6■□□□□ 0.41
CDKL5O76039 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.6■□□□□ 0.41
CDKL5O76039 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.6■□□□□ 0.41
CDKL5O76039 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.6■□□□□ 0.41
CDKL5O76039 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.6■□□□□ 0.41
CDKL5O76039 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.6■□□□□ 0.41
CDKL5O76039 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CDKL5O76039 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL5O76039 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms